Gene Information

Name : Rumal_0927 (Rumal_0927)
Accession : YP_004104087.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1061447 - 1063798 bp
Length : 2352 bp
Strand : +
Note : KEGG: cth:Cthe_0312 ATPase AAA-2; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGATAAAGTGTTCAAGGTGCGGTAAAAGACCTGCGGTGGTATTCGTATCATCCGCAAACCCCAATGACCCCACAAAGGC
TATGAAAAATGAGGGGCTTTGTCTTAGCTGTGCGAGAGAACTGAAGATCCCGCAGGTAGAGGACTACATCAAGAAGATGG
GTATCTCGGATGAGGAAATCGAGGCAATGAACAACACATTTGATGAACTGGACGACGGCACGGATTTTGAGCCGGGCGGA
AGCGGCACTATGCCCGATATACTGTCGAACCTGTTCGGCGGTATAAAGAATATGGCTGACAGCCTTGAGAAGAACCTGAC
AAACGGTGAAGGCTTCGGCAGCATGATGTCCGAAGCACCCAAGAAAAAATCTCCCGAGCAGGCAGAGAAAGAGCCGAGAG
GCAAGAACGGCAAAAAGCTGAAATTCTTAAACAACTACTGTACTAACCTGACCAAGAAAGCCCGTGACGGTGAGCTTGAC
AATATCATCGGCAGGGACAGGGAGATATCGAGAGTTGAGCATATCCTTTCAAGAAGGCAGAAGAACAATCCCTGCCTGAT
AGGTGAACCCGGTGTCGGAAAGACTGCCATCGCTGAGGGTATCGCTCAGAAGATAGTTGCAGGTGACGTACCTTTTCATC
TGCTGGATAAGGAGATATACCTGCTTGACCTGACATCACTTGTAGCAGGCACACAGTTCCGCGGACAGTTCGAGAGCCGC
TGCAAGGGTCTTGTGGAGGAAGTAAAGGCAGAGGGCAACATCATACTATTTATCGACGAAGTGCATACCCTTGTAGGCAC
AGGCGATTCCGAGGGCAGCATGAATGCGGCTAATATACTCAAACCCAGCCTTTCAAGAGGTGAGATACAGGTCATCGGTG
CAACTACTTTTTCGGAGTACCGCAAGTACATCGAAAAGGATTCCGCACTTGAAAGACGTTTCCAGCCTGTTACAGTAGGG
GAGCCTACAGTTGAGGATACCATATCGGTGCTGGAGGGCATAAGCAAGTATTACGAGGAGTATCACAGGGTACACGTTTC
AAAGGAGACCCTGAGAAAGTGCGCAATACTTTCCGAGAGATATATCAACGACAGATTCCTCCCCGACAAGGCTATCGACC
TGCTGGACGAAGCCTGCGCCTGCACAAGCATACGCACTCCCGAGATAGCTGACTATATAAATGCCAAGGACGAGCTGAAA
AAGCACACTGACCTTATAGATACCTACGAGCAGAAAGACGAGCCCGATTTTGAGATAATCGCAAGGGAGAAGAGCGAGAT
AAGCCGTCTGCAAAAGCAGATAGAAGACCTTGAGCAGAAGCTTTCCGAGGTATATGTTACCGACGAGGATATCTCCAAAG
TCATCGAACTGTGGACTGGTATACCCGCCAACAAGATAGCCGAGAGCGAATTCGAGAAGATACGCAATCTCAAAGACGAG
ATGTCCAAGAGGGTCATCGGTCAGGACGAAGCTGTTGACAAGGTGGCTAAGGCTATCAAGAGGACAAGAGTACAGCTGGA
TAAGCGCCGCAGACCTGCATCTTTCATCTTCGTAGGTCCCACAGGCGTAGGAAAGACCGAGCTTGTAAAGGTGCTGGGCG
AATCCCTCTTTGATGCTACAGAGCCCCTTATCAGGATAGATATGTCGGAGTATATGGAGAAGTACAGCGTATCCAAGCTC
ATCGGCTCACCTCCCGGATATGTGGGCTACGATGAGGCAGGTCAGCTGACTGAAAAGGTAAGGCGCAGACCTTACAGCGT
GGTGCTTTTCGATGAGATAGAAAAGGCTCACCCCGATGTTATGAATATACTCCTCCAGATACTTGACGAGGGCAAGATAA
ACGATTCACAGGGCAGGAGCGTTTCCTTTGAGAATACTGTCATCGTTATGACCTCCAACGCAGGTGCCGCTGATAAGGAC
ACTGGTGTGGGTTTCAACAAGACCGACACGGAGATAGCCGAAAACAAGGCTATGAAGGCACTGAGAGAGTTCCTGAAACC
CGAGTTTCTCGGCCGTGTGGACGAGATAGTTATGTTCAACGCCCTGACTAAGGAGAACTACGAGAAGATAGCTGCGCTGA
TGCTGGACGAGATGAAGCAGCCGCTTTCGGAAAAGGCTATAAAGCTGGAGTATACCGATGCTGCGCTTAAACTTATCGCA
GAAAAGAGCCATGGCAGAAAGCTTGGTGCGAGAGATATCCGCCGCGTGATAAGGGCAGAAGTCGAGGACAAGATAGCAGA
AGTCATCGTTGAAAACGGTGAGGGCTGTATAGGTCTTGTTAAGGTAGACGCAGACGGCGACAAGCTTATCGTTAATACCG
ATAAGGACAGCAGCGTGAAGCTTGCCAAGTAA

Protein sequence :
MIKCSRCGKRPAVVFVSSANPNDPTKAMKNEGLCLSCARELKIPQVEDYIKKMGISDEEIEAMNNTFDELDDGTDFEPGG
SGTMPDILSNLFGGIKNMADSLEKNLTNGEGFGSMMSEAPKKKSPEQAEKEPRGKNGKKLKFLNNYCTNLTKKARDGELD
NIIGRDREISRVEHILSRRQKNNPCLIGEPGVGKTAIAEGIAQKIVAGDVPFHLLDKEIYLLDLTSLVAGTQFRGQFESR
CKGLVEEVKAEGNIILFIDEVHTLVGTGDSEGSMNAANILKPSLSRGEIQVIGATTFSEYRKYIEKDSALERRFQPVTVG
EPTVEDTISVLEGISKYYEEYHRVHVSKETLRKCAILSERYINDRFLPDKAIDLLDEACACTSIRTPEIADYINAKDELK
KHTDLIDTYEQKDEPDFEIIAREKSEISRLQKQIEDLEQKLSEVYVTDEDISKVIELWTGIPANKIAESEFEKIRNLKDE
MSKRVIGQDEAVDKVAKAIKRTRVQLDKRRRPASFIFVGPTGVGKTELVKVLGESLFDATEPLIRIDMSEYMEKYSVSKL
IGSPPGYVGYDEAGQLTEKVRRRPYSVVLFDEIEKAHPDVMNILLQILDEGKINDSQGRSVSFENTVIVMTSNAGAADKD
TGVGFNKTDTEIAENKAMKALREFLKPEFLGRVDEIVMFNALTKENYEKIAALMLDEMKQPLSEKAIKLEYTDAALKLIA
EKSHGRKLGARDIRRVIRAEVEDKIAEVIVENGEGCIGLVKVDADGDKLIVNTDKDSSVKLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 8e-147 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_0927 YP_004104087.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 3e-149 50
Rumal_0927 YP_004104087.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 2e-148 48