Gene Information

Name : Rumal_0084 (Rumal_0084)
Accession : YP_004103280.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 78509 - 81133 bp
Length : 2625 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: cpy:Cphy_3819 ATP-dependent chaperone ClpB; SMART: AAA ATPase

DNA sequence :
ATGAATATGCAGAAATTTACCGAGAAATCGGTGCAGGCTGTACAGGATGCGCAGAATATCGCGGCAAGGCAGTCAAATCA
GGCGATAGGACAGGAACATCTGCTGAGCGCACTGTGCCTTGATGATAACGGTCTGATACCCCAGCTTCTCACACAGATGA
GCACGGATATCAACGCTTTCCGCGGCGCACTGGACAGGGCTGTTGATAAGATACCGAAAGTCACCGTGGGCGGACGCGCA
CAGGGTCAGATATATATTTCCAGCGAACTTGACCGCGCACTTGCCGAGGCAGAAGCACAGGCAAAGCAGATGGGCGATGA
GTTCGTATCCGTTGAGCATATATTCTTAGGTATAATGGAATGTGCAAACAGCGAAGTCGCAGAGGTACTGCGTACCTTCG
GCATAAACAAGACAGGTTTCCTTGCGGCGCTGAAACAGGTGAGAGGAAGCGCAAAGGTCACAAGCCAGAACCCCGAGGAG
ACTTATGATGTACTGAAAAAGTACGGTCAGGAGCTGGTAGGTCTTGCAAGACAGAACAAGCTCGACCCCGTTATCGGCAG
AGATTCCGAGATAAGAAACGTTATCCGCATACTCTCCCGTAAGACAAAGAACAACCCTGTGCTGATAGGCGAACCCGGCG
TAGGTAAAACAGCCGTTGCCGAGGGTCTTGCACAGCGTATCGTCAGCGGTGATGTGCCCGACAGCCTGAAAGACAGACAG
ATATTCTCGCTTGATATGGGCTCGCTGATAGCAGGTGCAAAGTTCCGCGGCGAGTTTGAAGAGAGATTCAAAGCCGTTGT
AAGCGAAATAAAGAAATCCGAGGGCAAGATAATACTGTTCATCGATGAACTTCACACCATCGTGGGCGCAGGAAAGTCCG
ACGGCGCTATGGATGCAGGAAATCTGCTGAAGCCTATGCTGGCAAGGGGCGAACTGCACTGCATCGGTGCCACCACCCTC
AACGAGTACAGACAGTACATCGAAAAGGATAAAGCCCTTGAAAGACGTTTCCAGCCCGTTATGGTAGATGAACCCAGCGT
TGAGGATACAATATCCATACTCCGCGGCATAAAGGAGAGATATGAGGTATTCCACGGCGTTAAGATACAGGATCAGGCGC
TGATAACAGCGGCTGTGCTTTCCGACAGATACCTGACAGACAGATTCCTGCCCGATAAGGCTATCGACCTTGTGGACGAA
GCCTGCGCACTTATCCGCACAGAGATGGACTCCATGCCCACCGAACTGGATGACCTGAGAAGAAAGATACTCCAGCACGA
GATCGAGGAAACTGTGCTTAAAAAGGAAAGCGACAAGCTTGCCGAGGAACATCTGGCAGAAGTTCAGAAAGAACTTGCCG
ATATGAGAGCGCAGTACGACGAGATGCGTGCTAAGTGGGAAAACGAAAAGAACGCTATCTCCAAGGTGCAGAAGATACGC
GAGGAGATAGATGCTGTAAACGGCGAGATAAAGCAGGCAGAGCGCGACTATGACCTCTCAAAGCTGGCAGAACTGAAATA
CGGCAAGCTGGAAAATCTGCAAAAGGAACTGGCAGAGGAAGAAAAGAAAGCAGAGCAGTCCTCAAAGAGCAATACCCTGC
TTAGAGATAAAGTCACCGATGACGAGATAGCGCGTATTATATGCCGCTGGACAGGCATACCCGTTGCAAAGCTTATGGAG
GGCGAGCGCGACAAGCTGTTAAGGCTTGAAAGCATACTCCATGAAAGAGTTATCGGACAGAACGAAGCTGTTGAAAAAGT
CAGCGAAGCTATACTCCGTTCAAGGGCAGGTATCGCAAATCCCAACACACCTATCGGTTCGTTCCTGTTCTTAGGACCTA
CGGGTGTGGGCAAGACCGAACTTGCAAAGACCCTTGCACAGGCACTGTTCGATGACGAGAACAATATCGTCCGTATAGAT
ATGTCGGAGTATATGGAGAAATTCAGCGTAACAAGGCTGATAGGAGCGCCTCCCGGATACGTGGGATATGAAGAAGGCGG
TCAGCTGACTGAGGCTGTACGCAGAAAGCCTTACTCCGTTGTACTGCTGGACGAAGTCGAGAAAGCTCACCCCGATGTGT
TCAATATACTCCTGCAGGTGCTCGATGACGGCAGAGTTACCGATTCACAGGGCAGAACGGTAGATTTCAAGAACACCGTT
ATCATACTGACCTCAAACCTGGGCTCACATTTCATACTTGAGGGCATCGACGAGGAAACAGGAGATATCAGCGAGGAAGC
AAGGGACAATGTCAACGACCTGCTGAAAACTCATTTCCGTCCCGAATTCCTGAACCGTCTTGACGAGATAGTAATGTACA
AACCTCTGCTGAAGAGCGAGATATACAGCATCTGCGGACTGATGCTGAAGAGCCTTGAAAAACGTCTTGCTGAAAAGCGC
CTGAAAATGGAGCTTACCGAATCTGCAAAAGCGGCGATAGTCGATCAGGGCTACAATATGGCATTCGGCGCAAGACCCCT
GAGAAGATTTATCCAGAGCCATGTGGAAACTCTGCTGGCAAAGGCAATAATCAGGGACGACCCTGCCGCTGACAGCCTGA
TGAAAGTCGATTATGACGGAAATGATTTCTCCGTTGAAACGATAGCACCCGAGATAAAAGAATAA

Protein sequence :
MNMQKFTEKSVQAVQDAQNIAARQSNQAIGQEHLLSALCLDDNGLIPQLLTQMSTDINAFRGALDRAVDKIPKVTVGGRA
QGQIYISSELDRALAEAEAQAKQMGDEFVSVEHIFLGIMECANSEVAEVLRTFGINKTGFLAALKQVRGSAKVTSQNPEE
TYDVLKKYGQELVGLARQNKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVAEGLAQRIVSGDVPDSLKDRQ
IFSLDMGSLIAGAKFRGEFEERFKAVVSEIKKSEGKIILFIDELHTIVGAGKSDGAMDAGNLLKPMLARGELHCIGATTL
NEYRQYIEKDKALERRFQPVMVDEPSVEDTISILRGIKERYEVFHGVKIQDQALITAAVLSDRYLTDRFLPDKAIDLVDE
ACALIRTEMDSMPTELDDLRRKILQHEIEETVLKKESDKLAEEHLAEVQKELADMRAQYDEMRAKWENEKNAISKVQKIR
EEIDAVNGEIKQAERDYDLSKLAELKYGKLENLQKELAEEEKKAEQSSKSNTLLRDKVTDDEIARIICRWTGIPVAKLME
GERDKLLRLESILHERVIGQNEAVEKVSEAILRSRAGIANPNTPIGSFLFLGPTGVGKTELAKTLAQALFDDENNIVRID
MSEYMEKFSVTRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVLDDGRVTDSQGRTVDFKNTV
IILTSNLGSHFILEGIDEETGDISEEARDNVNDLLKTHFRPEFLNRLDEIVMYKPLLKSEIYSICGLMLKSLEKRLAEKR
LKMELTESAKAAIVDQGYNMAFGARPLRRFIQSHVETLLAKAIIRDDPAADSLMKVDYDGNDFSVETIAPEIKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-105 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-105 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_0084 YP_004103280.1 ATP-dependent chaperone ClpB VFG2076 Protein 6e-114 43
Rumal_0084 YP_004103280.1 ATP-dependent chaperone ClpB VFG2084 Protein 4e-107 43