Gene Information

Name : Rumal_0531 (Rumal_0531)
Accession : YP_004103715.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 603319 - 604155 bp
Length : 837 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: bce:BC5180 transposase

DNA sequence :
GTGATATGGGAACTGAGGCATGAATTCAAGATAGGTCTGCTCATTGATGTTGCCGGAATCCCTCGCAGTACCTATTACTA
TTACAGCAAGCAATTCAATGATCCGAAACCGGATAAGTATGCAGCGATCAAGGAGGATATACGCAGGATATATGATGAAA
GAAAAGGACGCTATGGCTATCGCAAGATAACGAAAGAACTGAGAAAAACGCATAGGATAAACCACAAGACAGTTCAGCGA
TTAATGCGTAAAATTGGTATATTCTGCCGCGTTCGCATGAAAAAATACAACTCATTCAGGGGGGAAGTCGGCAGAATAGC
ACCAAATCTTCTGGTACGTGATTTCAAAGCGGATAAGCCAAATCAGAAATGGGTCACAGATGTGACAGAGTTTGCTCTGT
TTGGTATCAAGCTGTATCTGTCGCCGATCATTGATCTTTTCAACGGCGAAGTTGTGTCCTACAACCTGAATTACCACCCT
AATTTGAATCAAGTGACCGATATGTTGAATAAAGCATTTGCAAATATACCGGAAAACACCGGACTCATTTTGCATTCGAA
TCAGGGCTGGCAGTATCAGCACAAGCAGTACCAGAAAATGCTCAAAGATAAAGGCATAAGACAAAGTATGTCACGAAAGG
GAAACTGTCTCGACAACGCTTGTGCAGAAAACTTCTTTGGATTGCTGAAAACAGAACTTCTCTACTTACAGGAATTCTCA
TCTGTTGAGCACTTCATTTCAGAACTACATTCATACATCGCTTGGTACAACACAAAGCGCATCAAGCTTAAGCTTGATGG
TATGTCACCTGTTGAATACAGGCTCAACGTTGCATGA

Protein sequence :
MIWELRHEFKIGLLIDVAGIPRSTYYYYSKQFNDPKPDKYAAIKEDIRRIYDERKGRYGYRKITKELRKTHRINHKTVQR
LMRKIGIFCRVRMKKYNSFRGEVGRIAPNLLVRDFKADKPNQKWVTDVTEFALFGIKLYLSPIIDLFNGEVVSYNLNYHP
NLNQVTDMLNKAFANIPENTGLILHSNQGWQYQHKQYQKMLKDKGIRQSMSRKGNCLDNACAENFFGLLKTELLYLQEFS
SVEHFISELHSYIAWYNTKRIKLKLDGMSPVEYRLNVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 3e-71 55
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 1e-70 55
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 2e-54 50
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 2e-54 50
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 4e-52 45
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 6e-53 45
SE0101 NP_763656.1 transposase Not tested SCCpbp4 Protein 1e-21 41