Gene Information

Name : Rumal_0517 (Rumal_0517)
Accession : YP_004103703.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 588870 - 589571 bp
Length : 702 bp
Strand : -
Note : KEGG: cbe:Cbei_0262 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGTTTTTAGAGATACAAGATGTCAAGAAAAGCTACGGCAAAGACACAAGCTATATTCAGGTGCTGAAAGGTGTCAGCAC
CGCCGTTGAAAAGGGGCAGATGTGCGTTATACAGGGTACAAGCGGTTCGGGAAAATCGACGCTTCTCAACTGCATCGGCG
GACTTGATACTATGGATTCGGGGTCGGTCAGGGTAGACGGCAAGGAGATATTCGGTCTGCGCCCCGCTGAACTTTCCGAC
TACCGCCGCGACTATCTGGGATTTATTTTCCAGTTCTATAATCTGGTGCCTAACCTCACCGTAAGAGAGAATATACAGGT
CTGCGGATATCTGACGGATTCTCCCCTTGATATGGAGGAACTGCTGGAAGTTCTGGGTCTGACAGAACATCAGAACAAGT
TCCCCGCGCAGCTTTCGGGCGGTCAGCAGCAGAGGTGTGCAATAGCCCGCGCCCTTATCAAAAACCCGAAACTTCTCCTT
TGCGACGAACCTACAGGCGCTCTTGATTCAAAGACCTCCCGCGATATCCTGATACTTCTTGAGAAGATAAACAAAAAGTA
CGGCACTACAATGCTGATAGTCACCCACAATAACTCCATAAAAAATATGGTGCATAAGGTCATCGTTATCAAGGACGGTC
AGATCATAAAGGACTACGAAAATGAAAAGATAGTTCCCGCCGCCGAACTGGAGGACTTGTGA

Protein sequence : 
MFLEIQDVKKSYGKDTSYIQVLKGVSTAVEKGQMCVIQGTSGSGKSTLLNCIGGLDTMDSGSVRVDGKEIFGLRPAELSD
YRRDYLGFIFQFYNLVPNLTVRENIQVCGYLTDSPLDMEELLEVLGLTEHQNKFPAQLSGGQQQRCAIARALIKNPKLLL
CDEPTGALDSKTSRDILILLEKINKKYGTTMLIVTHNNSIKNMVHKVIVIKDGQIIKDYENEKIVPAAELEDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_0517 YP_004103703.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-42 46
Rumal_0517 YP_004103703.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-44 46
Rumal_0517 YP_004103703.1 ABC transporter-like protein NC_012469.1.7685735. Protein 6e-44 43
Rumal_0517 YP_004103703.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-31 41