Gene Information

Name : Rumal_0314 (Rumal_0314)
Accession : YP_004103505.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 324989 - 325198 bp
Length : 210 bp
Strand : +
Note : manually curated; PFAM: helix-turn-helix domain protein; KEGG: shi:Shel_05270 predicted transcriptional regulator; SMART: helix-turn-helix domain protein

DNA sequence :
ATGGACGAAACACTAATTCTGAAAAACCACCTGAAAGAAGCTCGCGCAGAAAAGAGGATATCTCAGGGGGCACTTGCGAA
AATGGTGGGCGTATCGAGAAATACCATAAGCTCCATTGAGACAGGGCAGTTTTCCCCTACTGCGAAACTTGCACTTATAA
TATGTATAGCCCTGGATAAAAAATTCGAGGAGCTGTTTTACTTTGATTGA

Protein sequence :
MDETLILKNHLKEARAEKRISQGALAKMVGVSRNTISSIETGQFSPTAKLALIICIALDKKFEELFYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 8e-07 45
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-07 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-07 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_0314 YP_004103505.1 XRE family transcriptional regulator VFG2168 Protein 2e-07 45
Rumal_0314 YP_004103505.1 XRE family transcriptional regulator VFG2175 Protein 2e-07 45