Gene Information

Name : Rumal_1878 (Rumal_1878)
Accession : YP_004105010.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2137238 - 2137429 bp
Length : 192 bp
Strand : -
Note : KEGG: amt:Amet_2257 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein

DNA sequence :
ATGAAGAACAGGATAAAGGAGCTTCGTAAGTCACAAAAACTTACTCAGGATGAGTTAGCAAATGCTGTGGGAGTCTCAAG
GCAGACGATCAATGCTATTGAAAATGATAAATATAACCCCACACTGGAACTTGCTATAAAATTGGCAAGATATCTCAGGA
TACCTGTGGAAGATCTGTTCATACTTGAATAA

Protein sequence :
MKNRIKELRKSQKLTQDELANAVGVSRQTINAIENDKYNPTLELAIKLARYLRIPVEDLFILE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-12 57
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-10 56
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-10 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_1878 YP_004105010.1 XRE family transcriptional regulator VFG2168 Protein 2e-10 56
Rumal_1878 YP_004105010.1 XRE family transcriptional regulator VFG2175 Protein 2e-10 56