Gene Information

Name : Rumal_1866 (Rumal_1866)
Accession : YP_004104998.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1135
EC number : -
Position : 2124319 - 2125119 bp
Length : 801 bp
Strand : +
Note : KEGG: cth:Cthe_1557 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAAAAAAATCATGAGTTCATACATAAGGATAGAAGGATTAAAAAAGACATTCAAAAATAAAAAAGAAGAAAACCATGT
TCTGAAAGGAATTGATCTTGATATAGATAGGGGTGATATATTTGGTATCGTTGGTTTTTCAGGTGCAGGAAAATCTACCC
TTGTACGGTGCATAAACCGACTGGAGGAACCTGACAGTGGAAAAATATTCATCGGTGATATTGAAATAACATCTCTTAAT
AAAAAGCAGCTAACAGAACGGCGAAAAAAGATAGGTATGATATTTCAGCAATTCAATCTTTTTGATTCAATGACAGTATT
TCAGAATATAGCCTATCCTTTGAAGCTTCTGGGAGTTTCAAAAAAGGAGATAGAATGGAAAGCTGACAAGCTGCTTGAAC
TTGTCGGACTATCAGATAAAAAGAATTCATATCCGGGTTCACTTTCTGGTGGGCAAAAACAGCGTGTTGGTATAGCAAGA
GCACTTGCGAACGATCCTGATATACTGCTTTCAGATGAAGCTACAAGTGCCTTAGATCCTGTATCAACTCTGGCTATACT
TGATCTTCTGGAGCATATAAATAAAGAGCTGGGTGTTACTATTATAATGATAACTCACGAACTTGAAGCTGCAAAACGAA
TATGCAACAGAGTTGCAGTTCTTGAAAACGGTGTTATCACAGAGATGGGCAGTACAAGAGATATCTTCCTTGATCCTAAA
AGCAATACAGGAAAGATATTTTTGGAAGTATACAAAGAATTCAGACAAGCGTCTTCATTTACAGGAGGTGATGGTATATG
A

Protein sequence : 
MKKIMSSYIRIEGLKKTFKNKKEENHVLKGIDLDIDRGDIFGIVGFSGAGKSTLVRCINRLEEPDSGKIFIGDIEITSLN
KKQLTERRKKIGMIFQQFNLFDSMTVFQNIAYPLKLLGVSKKEIEWKADKLLELVGLSDKKNSYPGSLSGGQKQRVGIAR
ALANDPDILLSDEATSALDPVSTLAILDLLEHINKELGVTIIMITHELEAAKRICNRVAVLENGVITEMGSTRDIFLDPK
SNTGKIFLEVYKEFRQASSFTGGDGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_1866 YP_004104998.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-36 44