Gene Information

Name : Rumal_1780 (Rumal_1780)
Accession : YP_004104912.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 2039081 - 2039557 bp
Length : 477 bp
Strand : -
Note : PFAM: transposase IS200-family protein; KEGG: cce:Ccel_0061 transposase IS200-family protein

DNA sequence :
ATGACAAGAGACGATATAAATAGTTTAGCACATTCCAAGTGGAATTGCAAGTACCATGTAGTATTTGCCCCGAAATATCG
AAGAATGGTGATTTATAATAAAATCAAAGTGGATATCGGAAAGATACTAAGAAAGTTGTGTGATCAAAAAGGAGTTAAAA
TAATCGAAGCAGAGGCGTGTCCTGATCATATACATATGCTGTTGTCTATTCCACCCAAATACAGTGTAGCAGAGATAATG
GGATATTTGAAAGGCAAGAGTAGTTTGATGATATTTGACAGACACGCAAATCTGAAATATAAGTATGGCAACAGGCACTT
CTGGTGCAGAGGATACTATGTTGATACAGTAGGAAAGAACAAGAAAAAGATAGCAGAGTACATCAGGAATCAGTTGCAGG
AAGATATAGTGTGCGACCAGATCAGCCTGTTTGAGACAGTAGACCCATTTACAGGAGAAAAATACAAGAAAAAGTAG

Protein sequence :
MTRDDINSLAHSKWNCKYHVVFAPKYRRMVIYNKIKVDIGKILRKLCDQKGVKIIEAEACPDHIHMLLSIPPKYSVAEIM
GYLKGKSSLMIFDRHANLKYKYGNRHFWCRGYYVDTVGKNKKKIAEYIRNQLQEDIVCDQISLFETVDPFTGEKYKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 1e-55 74
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 3e-44 68
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-36 64
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 7e-37 64
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 6e-45 61