Gene Information

Name : Rumal_1473 (Rumal_1473)
Accession : YP_004104611.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Virulence
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1689039 - 1689638 bp
Length : 600 bp
Strand : -
Note : PFAM: Resolvase domain; KEGG: cdl:CDR20291_3281 transposon Tn21 resolvase

DNA sequence :
ATGAGCAAAATCGGATACATCAGAGTTTCCACCGAACATCAGGAGACGGCAAGACAGCAGGAGATCATGTGCGACTATCA
GGTTGACCGCATCTTCTCCGAGAAGCTATCAGGAGCGAACACAGACCGCCCTCAGCTCAGGGCTATGCTGGACTATGTGC
GTGAGGGCGATACTCTCTATATCGAGAGCATCAGCCGTCTCGGACGCTCCACGAAAGACTTGCTGAACATCATCGACACC
CTGACGGAAAAGGGTGTTACCCTTATCAGCCACAAGGAGAAAATTGACACCGACACGCCTGCGGGTAAATTTATGTTGAC
TGTGTTCGCTGCACTCTCTCAGTTGGAGCGTGAGCAGCTTAAACAGCGACAGCGTGAGGGCATCGAGATCGCTAAGGCAC
AGGGCAAGTACACCGGGCGAAAGCCTATCCCCACCGACTGGACGAGGTTCGGGCAGCTCTATGGGGAATGGAAATCAAAG
CACATCACGGGGCGTGATTTTATGCGGAGAATGGATATGTCGGCAAATACCTTTTACCGCCGTGTGCGTGAGTATGAACG
TAAGCGTATAACCCCCAGCACCTACCCCACCGAAGTCTAA

Protein sequence :
MSKIGYIRVSTEHQETARQQEIMCDYQVDRIFSEKLSGANTDRPQLRAMLDYVREGDTLYIESISRLGRSTKDLLNIIDT
LTEKGVTLISHKEKIDTDTPAGKFMLTVFAALSQLEREQLKQRQREGIEIAKAQGKYTGRKPIPTDWTRFGQLYGEWKSK
HITGRDFMRRMDMSANTFYRRVREYERKRITPSTYPTEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 8e-18 43
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-17 43
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 8e-18 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_1473 YP_004104611.1 resolvase domain-containing protein VFG1030 Protein 3e-18 43