Gene Information

Name : Rumal_1439 (Rumal_1439)
Accession : YP_004104583.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1639235 - 1639903 bp
Length : 669 bp
Strand : +
Note : KEGG: cce:Ccel_0557 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATCATGGGTATTATTTCATTAAAAAACGTAAACAAATACTATAAAACAGGTGATAACTCCTTTCACGCATTAAAGGA
TATTAACCTTGAAATCGAAGAAGGCGAGTTCGTTGTTATACTTGGAAAAAGCGGTTCGGGAAAAAGTACTCTGCTTAATG
TCATCGGGGGGCTTGACGGATATGATTCGGGTGATGTTATCATGGAGGGTTTCAATTACCAAAATGCTGACGATACTTTG
ATGTCAGATCTTAGATGCAGAAAGATAGGATTTGTTTTCCAGGCTTACAATCTCATACCAGTACTCAATGTTTATGAGAA
TATCACCTTTCCGGTAAATATAAACGGTGGAAAGATAGATAAGGAATACATAGCGAATATCATAAAAGAACTGGGACTTG
AAGGCAAGGAAATGTCATTCCCGAATCAGCTTTCGGGTGGACAGCAGCAAAGAGTTGCTATAGCAAGAGCTCTTGCCAAT
AAACCTAAGATAGTTCTTGCAGATGAACCCACAGGAAATTTGGATACTGCCATAAGCTCAGATGTAATAGAGCTACTTAC
CCATGGAGTAAAGGAGTATGGTCATACTCTAGTAATGATAACTCACGATCCTGATATCGCACAGTACGCAGACAGAGTTG
TAACTATAGAAGATGGTAGAATCGTATAA

Protein sequence : 
MIMGIISLKNVNKYYKTGDNSFHALKDINLEIEEGEFVVILGKSGSGKSTLLNVIGGLDGYDSGDVIMEGFNYQNADDTL
MSDLRCRKIGFVFQAYNLIPVLNVYENITFPVNINGGKIDKEYIANIIKELGLEGKEMSFPNQLSGGQQQRVAIARALAN
KPKIVLADEPTGNLDTAISSDVIELLTHGVKEYGHTLVMITHDPDIAQYADRVVTIEDGRIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-39 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_1439 YP_004104583.1 ABC transporter-like protein CP001581.1.gene598.p Protein 9e-53 52
Rumal_1439 YP_004104583.1 ABC transporter-like protein CP001581.1.gene798.p Protein 8e-48 51
Rumal_1439 YP_004104583.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-41 46
Rumal_1439 YP_004104583.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-36 43
Rumal_1439 YP_004104583.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-36 41