Gene Information

Name : Rumal_0125 (Rumal_0125)
Accession : YP_004103321.1
Strain : Ruminococcus albus 7
Genome accession: NC_014833
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 124960 - 125670 bp
Length : 711 bp
Strand : +
Note : KEGG: ere:EUBREC_2393 ABC transporter (ATP-binding protein); PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGTATTTGAACTGAACAATATATTCAAGGACTATATGCAGGGCAAAGAACCTGTCCCCGTACTGAAGGACATCTCACT
GAGTGTTGATGACGGCGAGTATGTTGCTATAATGGGACCTTCGGGCTCGGGTAAATCCACACTGATGAACATAATCGGAT
GCCTTGACAAGCAGACAAAGGGCAGTTTCATATTCGATGGTTCGGATATAATGAAATGCAGCGACAAGCAGCTTTCGGAT
ATACGCAATACCAAAATAGGATTCGTTTTCCAGAACTTCAATCTTCTGCCAAGACAGTCGGCTCTGGAAAACGTGGAGCT
GCCCCTGCTGTATGCGGGCTTTTCAAGAAAGAAACGCCGTGAGATGGCAAAGGAAGCCCTTCGCAGAGTAGGACTTGAGG
ACAGGATGAACTTCAATCCCACTCAGCTTTCCGGCGGACAGAAGCAGAGAGTAGCAATAGCAAGAGCAATAGTGAACAAG
CCGAAGCTTCTGCTGGCTGACGAGCCTACGGGCGCACTGGACACAAAGTCGGGCGATGATGTAATGGAGCTTTTTGAGGA
GCTCAACGGCGACGGCGTGACCATAGTAATGATAACCCACGAACCCGAGATAGCTGAGCACGCAAAGCGTGTGATGTACA
TACGTGACGGTGAGCTGCACAGCGGTGCATTCAACAGCCGCATAAAGAAAGAGGAGGAGCAGAGCGAATGA

Protein sequence : 
MVFELNNIFKDYMQGKEPVPVLKDISLSVDDGEYVAIMGPSGSGKSTLMNIIGCLDKQTKGSFIFDGSDIMKCSDKQLSD
IRNTKIGFVFQNFNLLPRQSALENVELPLLYAGFSRKKRREMAKEALRRVGLEDRMNFNPTQLSGGQKQRVAIARAIVNK
PKLLLADEPTGALDTKSGDDVMELFEELNGDGVTIVMITHEPEIAEHAKRVMYIRDGELHSGAFNSRIKKEEEQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_0125 YP_004103321.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-61 56
Rumal_0125 YP_004103321.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-47 47
Rumal_0125 YP_004103321.1 ABC transporter-like protein CP001581.1.gene798.p Protein 7e-37 46
Rumal_0125 YP_004103321.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-33 44