Gene Information

Name : Tmar_0879 (Tmar_0879)
Accession : YP_004101720.1
Strain : Thermaerobacter marianensis DSM 12885
Genome accession: NC_014831
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 1062187 - 1062879 bp
Length : 693 bp
Strand : +
Note : COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR001608: IPR011078; KEGG: mta:Moth_0858 hypothetical protein; PFAM: alanine racemase domain protein; SPTR: uncharacterized protein; PFAM: alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosp

DNA sequence :
ATGACCATTGCCGAACGGGTGGCCGCCGTGCGGGAGCGCATCGCGGCCGCGGCGGCCCGGGCGGGGCGGGATCCCGGCGA
GATCACCCTGGTGGCCGTCAGCAAGACGGTCCCCGTCGCCGCCATGCGGGAGGCCTACGCCGCCGGGATCCGCCACTTCG
GGGAGAACCGGGCGCAAGAGGCCCGGGACAAGTTCCCCGCCTTCGGCGACGACGTGCACTGGCATTTCGTGGGTCGCCTG
CAGACCAACAAGGTGAAGTACATCGCCCGGCACTGCCACCTGCTCCATTCCCTGGACCGGCTGGCCCTGGCCCAGGAGGT
CGACCGGCGGGCCAGCCGCTGCGGCCGGGTTCTACCGTGTCTCGTGGAGGTCAACGTGGCCGGGGAAGCCACCAAAGCGG
GCCTGCCGCCCGAGAAGGTCATCCCCTTCCTGCACCAGGTGGCCGGCTGGCCCGGGCTGCGGGTGGTGGGCCTGATGACC
GTGGCGCCCCGGGCCGATAACCCGGAAGAGGTGCGCCCGGTCTTCCGGCGCCTGCGCGAGCTGGCCGAGGAGGCCGCCCG
GCAGTGCCGGGGGCTTCCGGGAATCGAGCTGCGCCACCTGTCCATGGGGATGACCGACGACTTCGAAGTGGCGGTGGAAG
AGGGCGCGACCCTGGTGCGCATCGGCCGGGCCATCTTCGGCGAGCGTGGATGA

Protein sequence :
MTIAERVAAVRERIAAAAARAGRDPGEITLVAVSKTVPVAAMREAYAAGIRHFGENRAQEARDKFPAFGDDVHWHFVGRL
QTNKVKYIARHCHLLHSLDRLALAQEVDRRASRCGRVLPCLVEVNVAGEATKAGLPPEKVIPFLHQVAGWPGLRVVGLMT
VAPRADNPEEVRPVFRRLRELAEEAARQCRGLPGIELRHLSMGMTDDFEVAVEEGATLVRIGRAIFGERG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-26 41
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-26 41
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 2e-26 41
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-26 41