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Name : Tmar_0009 (Tmar_0009) Accession : YP_004100861.1 Strain : Thermaerobacter marianensis DSM 12885 Genome accession: NC_014831 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 12697 - 13974 bp Length : 1278 bp Strand : + Note : COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866: IPR002314: IPR002317: IPR006195: IPR 018156; KEGG: adg:Adeg_0011 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: serine--tRNA ligas DNA sequence : TTGCTGGACTTGCGGTTCGTGCGCCAGAACCCGGAGGTGGTCCGCGAGGCCCTGCGCCGGCGGCGCCTGGATCCCGCGGA GCTTGATGCCCTCCTGGATGCCGACGCCCGCTGGCGCCAGGACCTCCAGCAGCTCGAGGAGTTGCGCGCCCGGCGCAACC AGACCTCGGAGGCCATCGGCCGACTGCGCCGGGAGGGGGCCGACGCCAGCGAGCTCATCGCCGCCATGCGCCAGGTGGGT GACTCCATCAAGGAACTGGAGGAGCGGGTGCGTGGCCTGGAACAGGAGATCCAGGATCGACTGCTGCGCATCCCCATGAT CCCCGACCCCGATGTACCCGAGGGCGACGACGCGGACGACAACGTGGAGGTGCGCCGCTGGGGAACGCCGCCTTCCTTCG ACTTCACACCGAAGGCCCACTGGGAACTGGGGCCGGCCTTGGGGCTGTTGGACTTCGAGCGGGCGGCCAAGATCACCGGC GCGCGCTTCACCGTCTTCCGCGGCCGCGGCGCGCGCCTGGTGCGGGCGCTGATCCAGTTCATGCTGGATCTTCACACGCA AGAACACGGCTACACCGAGGTGCTGCCGCCCTTCCTGGTCCACCGGCAGAGCATGGTGGGCACGGGCCAGTTGCCCAAGT TCGAGGAAGACGCCTTCCGGGTGGCGGACTCGGATTTCTTCCTGGTCCCCACGGCGGAGGTGCCCGTCACCAACCTCTAC CGCGACGAGATCCTGGACGGCGCGCAGCTGCCGATCTACCACGTGGCGTACACGCCGTGCTTCCGCGCCGAGGCGGGCTC CGCCGGCCGCGACACCCGCGGCCTGATCCGCCAGCACCAGTTCGACAAGGTGGAGCTGGTCAAGTTCGTCCACCCCGACC GTTCCGCCGAGGAGCACGAGAAGCTGGTGGCCGACGCCGAGGCCGTGCTGCAGCGGCTGGGCCTGCCGTACCGGCTGGTG CTGATCTGCACCGGCGATATGGGCTTCGCCCAGGCCAAGCAGTACGATCTGGAGGTGTGGATGCCCAGCTACGGGCGCTA CGTGGAGATCTCCTCCTGCAGCAACTACCGCGACTACCAGGCGCGGCGCGCCAACATCCGCTTCCGCCCGGAGCCCGGCG CGCGGCCGCAATTCGTCCACACGCTGAACGGGTCGGGGCTCGCCGTGGGCCGCACCCTGGCGGCGCTGCTCGAGAACTAT CAGCAGGCCGACGGCAGCGTGGTCATCCCCGAGGCGCTGCGGCCCTACATGGGCGGACTCGACGTGCTGAAGCCGTAG Protein sequence : MLDLRFVRQNPEVVREALRRRRLDPAELDALLDADARWRQDLQQLEELRARRNQTSEAIGRLRREGADASELIAAMRQVG DSIKELEERVRGLEQEIQDRLLRIPMIPDPDVPEGDDADDNVEVRRWGTPPSFDFTPKAHWELGPALGLLDFERAAKITG ARFTVFRGRGARLVRALIQFMLDLHTQEHGYTEVLPPFLVHRQSMVGTGQLPKFEEDAFRVADSDFFLVPTAEVPVTNLY RDEILDGAQLPIYHVAYTPCFRAEAGSAGRDTRGLIRQHQFDKVELVKFVHPDRSAEEHEKLVADAEAVLQRLGLPYRLV LICTGDMGFAQAKQYDLEVWMPSYGRYVEISSCSNYRDYQARRANIRFRPEPGARPQFVHTLNGSGLAVGRTLAALLENY QQADGSVVIPEALRPYMGGLDVLKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-108 | 60 |
