Gene Information

Name : Tmar_0569 (Tmar_0569)
Accession : YP_004101417.1
Strain : Thermaerobacter marianensis DSM 12885
Genome accession: NC_014831
Putative virulence/resistance : Unknown
Product : NLPA lipoprotein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1464
EC number : -
Position : 680235 - 681158 bp
Length : 924 bp
Strand : -
Note : COGs: COG1464 ABC-type metal ion transporter periplasmic component/surface antigen; InterPro IPR004872; KEGG: tpd:Teth39_1334 YaeC family lipoprotein; PFAM: NLPA lipoprotein; SPTR: Lipoprotein, YaeC family; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, Ya

DNA sequence :
ATGCGTGGTCGTTCCCCTCTCTTCGCCCGCCGGCGGTGGGTCCGCCTGGCGGCGGCGCTGCTCATGACCCTGCTGGTGGC
GGCCCTGGCGGCCGGGTGCGGCGGCGCCAACTCCGCCGGTTCGTCCAGCAGTTCGTCCGGTGAGGGTTCCGCCAGCGGCG
AGGCTGGGGGGCAGCAGGGTACCGTCACCTTGAAGGTCGGCGCCACGGCGGTCCCCCACGCCGAGATCCTCCGCGACGTG
GCGGCCCCGGCCCTTGAGAAGCAGGGCATCAAGCTGGAGGTCATCGAGTTCAGCGACTACACGAAGCTGAACCCGGCCCT
GGTCGACGGCGAGCTGGACGCCAACTACTTCCAGCACATCCCGTACCTGGACCAGTTCAACAAGGACCACGGGACCAACA
TCACGCCGCTGGCCAAGGTCCACATCGAGCCCATGGGCCTGTATTCCGATAAGATCACCGACCTCAGCCAGCTGCAGGAC
GGCGCCACGGTGGCGATCCCCAACGACCCGACCAACGGCGGGCGGGCGCTGCTGTTGCTGCAGTCGGCGGGCCTGATCAA
GCTCAAGGAGGGCGCGGACTACACGGCCACGGTGCGGGACATCGTCGAGAATCCGAAGAACCTGCAGATCCGCGAGGTGG
CGGCGGAGCTGATCCCGCGCACCCTGGCCGACGTGGACCTGGCGGCCATCAACACCAACTACGTGCTGGAGGCCAAGCAA
GCCGGGGCGATGAAGAACCCCGAGCCGCTGTTCATCGAAGACGCCGACTCGCCCTTCGCCAACGTGCTGGCGGTGCGGCC
GGAAGACGTCAACCGGCCCGAGCTCAAGGCGCTGGCGGAGGTCCTGGTGGGTCCCGAGGTCAAGCAGTACATCGAAGAGA
ACTACGACGGCGCCGTGGTGCCGGCCCAGGCGCTGCTGCGGTGA

Protein sequence :
MRGRSPLFARRRWVRLAAALLMTLLVAALAAGCGGANSAGSSSSSSGEGSASGEAGGQQGTVTLKVGATAVPHAEILRDV
AAPALEKQGIKLEVIEFSDYTKLNPALVDGELDANYFQHIPYLDQFNKDHGTNITPLAKVHIEPMGLYSDKITDLSQLQD
GATVAIPNDPTNGGRALLLLQSAGLIKLKEGADYTATVRDIVENPKNLQIREVAAELIPRTLADVDLAAINTNYVLEAKQ
AGAMKNPEPLFIEDADSPFANVLAVRPEDVNRPELKALAEVLVGPEVKQYIEENYDGAVVPAQALLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 8e-36 42
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 4e-34 42