Gene Information

Name : Tmar_1635 (Tmar_1635)
Accession : YP_004102471.1
Strain : Thermaerobacter marianensis DSM 12885
Genome accession: NC_014831
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1974319 - 1975086 bp
Length : 768 bp
Strand : +
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: sth:STH750 two-component response regulator; PFAM: response regulator receiver; transcriptional regulat

DNA sequence :
GTGACCCTGCCCCGGGACGAACACGGCCCCGCCGGCGCTGCGGGGCCCGGCCGGGCCGGATCCGGCCTGGCCGGGTCGAT
CCCCGCGGGTCCCGCCGTCCTCGTCGTCGACGACGAGGACGCCCTGCTGGAACTGGTCGCCTACAACCTGCGGCGCAACG
GCATGGAGCCCGTCCTGGCCCGGGACGGGGCCGAGGCCCTGCGCTGCATCGAGGAACGCCGGCCCCAGGTGATCATCCTG
GACGTGATGCTGCCGGACACCGACGGCTTCACCCTGTGCCGCCACCTGCGGGAACGGGGCGTCCAGACCCCCATCCTGAT
GCTGACGGCCCGGGACAGCGAGATCGACAAGGTGCTGGGGCTGGAGCTGGGCGCCGACGACTACGTGACCAAGCCCTTCA
GCCCCCGGGAGCTGGTGGCCCGCATCAAGGCGCTGCTGCGCCGGACCGAAGGGCGGCGCCAGCAGGTGGGCCCCATCGTG
ATCGACTACGCCGGCCACGAGGTCTACCGGGACGGCCAGCGGGTCCAGCTGACGCCCACGGAGTTCAAGCTGCTGGCCAC
CCTGGCGTCAGAACCGGGCCGCGCCTTCTCCCGGCAGGAGCTGCTGGACCGGGTCTGGGGCGAGGACGCCTTCGGCGACC
CGCGGACGGTGGACGTCCACGTCCGCCACCTGCGCGAGAAGCTGGAGCGCAACCCCAGCCAGCCGGAGTGGATCCTCACC
GTGCGCGGCCACGGCTACAAGTTGAACTCGCCGGTGGCGCGGCTGTAG

Protein sequence :
MTLPRDEHGPAGAAGPGRAGSGLAGSIPAGPAVLVVDDEDALLELVAYNLRRNGMEPVLARDGAEALRCIEERRPQVIIL
DVMLPDTDGFTLCRHLRERGVQTPILMLTARDSEIDKVLGLELGADDYVTKPFSPRELVARIKALLRRTEGRRQQVGPIV
IDYAGHEVYRDGQRVQLTPTEFKLLATLASEPGRAFSRQELLDRVWGEDAFGDPRTVDVHVRHLREKLERNPSQPEWILT
VRGHGYKLNSPVARL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 2e-29 42
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 2e-29 42
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 2e-29 42
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 2e-29 42
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 1e-28 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-32 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-31 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-23 41
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 7e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmar_1635 YP_004102471.1 transcriptional regulator NC_002952.2859905.p0 Protein 2e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_007793.3914279.p0 Protein 3e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_002745.1124361.p0 Protein 3e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_009782.5559369.p0 Protein 3e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_002951.3237708.p0 Protein 3e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_003923.1003749.p0 Protein 3e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_002758.1121668.p0 Protein 3e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_007622.3794472.p0 Protein 2e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_009641.5332272.p0 Protein 3e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_013450.8614421.p0 Protein 3e-46 52
Tmar_1635 YP_004102471.1 transcriptional regulator NC_012469.1.7685629. Protein 5e-42 52
Tmar_1635 YP_004102471.1 transcriptional regulator HE999704.1.gene2815. Protein 3e-45 48
Tmar_1635 YP_004102471.1 transcriptional regulator NC_012469.1.7686381. Protein 6e-43 47
Tmar_1635 YP_004102471.1 transcriptional regulator AE000516.2.gene3505. Protein 3e-38 46
Tmar_1635 YP_004102471.1 transcriptional regulator CP000034.1.gene3834. Protein 4e-26 44
Tmar_1635 YP_004102471.1 transcriptional regulator BAC0533 Protein 7e-26 44
Tmar_1635 YP_004102471.1 transcriptional regulator NC_002695.1.915041.p Protein 4e-26 44
Tmar_1635 YP_004102471.1 transcriptional regulator CP001138.1.gene4273. Protein 1e-25 44
Tmar_1635 YP_004102471.1 transcriptional regulator CP000647.1.gene4257. Protein 7e-26 44
Tmar_1635 YP_004102471.1 transcriptional regulator AE016830.1.gene1681. Protein 7e-39 43
Tmar_1635 YP_004102471.1 transcriptional regulator NC_010410.6002989.p0 Protein 9e-35 43
Tmar_1635 YP_004102471.1 transcriptional regulator NC_010400.5986590.p0 Protein 3e-35 43
Tmar_1635 YP_004102471.1 transcriptional regulator NC_011595.7057856.p0 Protein 9e-35 43
Tmar_1635 YP_004102471.1 transcriptional regulator CP004022.1.gene3215. Protein 5e-29 43
Tmar_1635 YP_004102471.1 transcriptional regulator CP001485.1.gene721.p Protein 1e-29 43
Tmar_1635 YP_004102471.1 transcriptional regulator CP001138.1.gene2239. Protein 8e-38 43
Tmar_1635 YP_004102471.1 transcriptional regulator BAC0039 Protein 2e-38 43
Tmar_1635 YP_004102471.1 transcriptional regulator CP001918.1.gene3444. Protein 2e-37 43
Tmar_1635 YP_004102471.1 transcriptional regulator BAC0596 Protein 8e-38 43
Tmar_1635 YP_004102471.1 transcriptional regulator CP000034.1.gene2186. Protein 2e-38 43
Tmar_1635 YP_004102471.1 transcriptional regulator NC_002695.1.916589.p Protein 2e-38 43
Tmar_1635 YP_004102471.1 transcriptional regulator CP001918.1.gene5135. Protein 2e-25 43
Tmar_1635 YP_004102471.1 transcriptional regulator NC_014475.1.orf0.gen Protein 7e-37 43
Tmar_1635 YP_004102471.1 transcriptional regulator NC_005054.2598277.p0 Protein 7e-37 43
Tmar_1635 YP_004102471.1 transcriptional regulator BAC0197 Protein 9e-26 43
Tmar_1635 YP_004102471.1 transcriptional regulator CP000647.1.gene2531. Protein 4e-37 42
Tmar_1635 YP_004102471.1 transcriptional regulator AF162694.1.orf4.gene Protein 1e-29 42
Tmar_1635 YP_004102471.1 transcriptional regulator BAC0125 Protein 1e-28 41
Tmar_1635 YP_004102471.1 transcriptional regulator CP000675.2.gene1535. Protein 2e-32 41
Tmar_1635 YP_004102471.1 transcriptional regulator AM180355.1.gene1830. Protein 5e-34 41
Tmar_1635 YP_004102471.1 transcriptional regulator BAC0111 Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmar_1635 YP_004102471.1 transcriptional regulator VFG1390 Protein 2e-32 46
Tmar_1635 YP_004102471.1 transcriptional regulator VFG1389 Protein 1e-29 45
Tmar_1635 YP_004102471.1 transcriptional regulator VFG1386 Protein 7e-32 43
Tmar_1635 YP_004102471.1 transcriptional regulator VFG1563 Protein 3e-32 42
Tmar_1635 YP_004102471.1 transcriptional regulator VFG1702 Protein 6e-32 42
Tmar_1635 YP_004102471.1 transcriptional regulator VFG0596 Protein 8e-24 41