Gene Information

Name : Tmar_1617 (Tmar_1617)
Accession : YP_004102453.1
Strain : Thermaerobacter marianensis DSM 12885
Genome accession: NC_014831
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1947540 - 1948496 bp
Length : 957 bp
Strand : +
Note : COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: hmo:HM1_1646 bacitracin abc transporter; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: bacitracin abc transporter; PFAM: ABC transporter

DNA sequence :
ATGGACAGCACGACCGCCGCCGTGCAGCTGCGCGGGGTCGGCAAGCGGTACGGCCCCTGCTGGGCGGTGCGCGACCTCGA
CATGGCGGTGCGCAGCGGCGAGGTCTATGCCCTGCTGGGCCGCAACGGCGCCGGCAAGACCACCACGCTGCGGATGATCC
TGGGCCTGGCGCGCCGATCCACCGGGGAGATCGAGCTGTTCGGGCGCCGCCTCGAGGATTGGGGTGCCGAAGTCTACCGG
CGCGTCGGGGCGACGGTGGAGACCCCGGGCTTCTACGGCAACCTGACGGCGCGGGAGAACCTCCTGCACAACCTGATGAT
CCTCGGCGTCCCGGAGCCCCGCCGCATCGACGAAGTCCTCGAACTGGTGGGACTGCGCCAGGCCGCCGACCGGCGGGTAC
GGGAGTTCTCCCTGGGCATGCGCCAGCGGCTGGGCATCGCCCGTGCCCTGCTGCACGAACCCCGGCTCCTCATCCTGGAC
GAACCCACCAACGGGCTGGACCCCGCCGGCATCCGCGAGGTGCGCGAGCTGATCCGGGAGCTGGCCGCAGAGCGGCAGAT
GGCGGTGCTCCTCTCCAGCCACATCCTGGCCGAGGTGGAACAGGTCGCCGACCGGGTCGGCATCCTGCACGAGGGCCGGC
TGGTGGAGGAGGTGAGCATGGGCGAGCTGCGGGACCGCGGTCGCGCGTACGTGGTAATCGAGACCCGCGAGCCCGAGGCC
GCCGTGCGCCTGCTGGAGGAACGCCTCGCGGTGCGCCGCTACACCGTGCTGCCCGGCGGCACGCTGCGGGTCTACGAGCA
CGTGGACCGGCCGGAGGAGGTGGCCCGCGTCCTGATCGAACACGGGCTGCCGGTGACCCACCTGGCGGTGCAGCGGGAGA
GTCTCGAGGACCACTTCCTGCGTGCCACGGCGGGGATGGGGACGAACCCGGACGGCCGGTCGGGCAGGGCGTCGTGA

Protein sequence :
MDSTTAAVQLRGVGKRYGPCWAVRDLDMAVRSGEVYALLGRNGAGKTTTLRMILGLARRSTGEIELFGRRLEDWGAEVYR
RVGATVETPGFYGNLTARENLLHNLMILGVPEPRRIDEVLELVGLRQAADRRVREFSLGMRQRLGIARALLHEPRLLILD
EPTNGLDPAGIREVRELIRELAAERQMAVLLSSHILAEVEQVADRVGILHEGRLVEEVSMGELRDRGRAYVVIETREPEA
AVRLLEERLAVRRYTVLPGGTLRVYEHVDRPEEVARVLIEHGLPVTHLAVQRESLEDHFLRATAGMGTNPDGRSGRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 5e-38 43
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 5e-38 43
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-34 41
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 4e-34 41