Gene Information

Name : Tmar_1608 (Tmar_1608)
Accession : YP_004102444.1
Strain : Thermaerobacter marianensis DSM 12885
Genome accession: NC_014831
Putative virulence/resistance : Resistance
Product : mercuric reductase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : 1.16.1.1
Position : 1936903 - 1938654 bp
Length : 1752 bp
Strand : +
Note : COGs: COG1249 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR000815: IPR013027: IPR006121: IPR011796: IPR 012999: IPR017969: IPR004099: IPR021179; KEGG: gka:GK3096 mercuric reductase; PFAM: FAD-dependent pyr

DNA sequence :
TTGTCAACCTTGAAGCCGGGTCGCTATCATCTCGCGATCGAGGGCATGACCTGTGCACACTGCGCGACCACCGTGCAGCT
GGCTTTGGAACAGGCCGGAGCGCGGGCGGTAGAAGCCGACTTCCGGCGCGGTGTGGCGGTGTTCGACCTGCCGCAACCCG
CCGATCCCGAGGACCTGCGGGCCGCCGTACGGGGGGCCGGTTACCAGCCCGGGGCCTTGGCACGGCTGGAACCGGGCGAC
GGTTGCTCCCAGGCGGCCCCAGCCCCTCAGGCTGTTCGGGCCGCTCAGTCGTCCCCCGCCCCTCATGCCTCTCCCGCCTC
CAAAGCAACACCCCGCCAACCCTATGATCTGGTGATCGTTGGTTCAGGGTCGGCTGCTTTCGCCGCCGCCATCGAGGCGA
GCCAGGGGGGTGCCCGGGTGGCCATGGTCGAGCGGGGCGTGGTGGGGGGCACCTGTGTCAACATCGGCTGCGTGCCGTCG
AAGACGCTGCTGCGGGCCGCCGAGATCTACTTCCGCACTCGCCACCACCCTTTCGCCGGCATCGCCACCCAGGCGGGGCC
GGTGGACCTACCGCTGCTCATCGGCCAGAAGAACGAGCTGGTTTCGCGGCTGCGGTACCAGAAGTACGAGCGCCTGGTTG
ATACGTACGGCTTCGACCTGCTGCGCGGCGAGGGGCGGTTCCTCGATGCCCATACCCTGCAGGTAGTCGACCCGCAGAAC
GGTGAGGTGAGCCGGACGCTCGAGGCCCGGGCGTTCCTCATCGCGACCGGCGCCGCCCCGGCCGTCCCCGACGTGCCGGG
GCTCGAGGCCGTCGACTTCCTGACCAGTACCTCGGCCCTCGACCTGCGGCGGCTGCCCGAGAGCGTGGCCGTCATCGGCG
CGGGGTACATCGCCCTGGAGCTGGGCCAGTTCTTCCGGCACCTGGGGGCCCAGGTGACCATCATGCAGCGCAGCCCCGAG
CTGCTGAAGGCGTATGACCCTGAGATTCGAGACGCCGTTCGCCGCATGCTGGACGAACACGGCATCGAGGTGCTGACAGG
GGTTCGCTACCTCGGGGTCGACCAGGCGGGCGGGCTCAAGCGGGTGCGGCTTGAGGTCGCGGGGGTCGAACGGGCCGTCG
AGGCGGAGGCCCTGCTGGTTGCGACGGGCCGGCGCCCCAATACCGCGGCGCTACAGCTCGACAGGGCCGGCGTCCGTACG
GGACTCCGCGGCGAGGTTGTGGTCGACGAGCAGCTGCGGACCAGCGTCCCCCACATCTTCGCGGCCGGCGACGTGACCAT
GGGGCCCCAGTTCGTCTATGTGGCCGCCTACCAGGGCGCCCTGGCCGCCCGCAACGCCGTCTGTGGAGCAGAGGAGCGGG
TCGATCTGCGTGCCGTCCCGCGGGTGACCTTCACCACCCCGGCCATCGCTAGCGTGGGTCTGACGGAGGAGCAGGCCCGG
GCCGCCGGCCACCGGGTACGGGCCTCCGTCCTCCCCCTGGAGACGGTGCCACGGGCCCTGGCTAATCGCGAGACCACCGG
GGTGTACAAGTTGGTCGCCGACGCCGACACAGGCCGGTTGCTGGGGGCCCACGTGGTGGCAGAGAATGCTGGCGATGTGA
TCTACGCCGCTACCCTGGCCGTCAAGTTCGGGCTGACGATCGAAGACCTGCGGTCCACCCTGGCACCATACCTGACCATG
GCCGAGGGACTGAAGCTTGCGGCACTGGGTTTCAAGACCGAGGTCTCCAACCTCTCCTGTTGCGCGGGGTAG

Protein sequence :
MSTLKPGRYHLAIEGMTCAHCATTVQLALEQAGARAVEADFRRGVAVFDLPQPADPEDLRAAVRGAGYQPGALARLEPGD
GCSQAAPAPQAVRAAQSSPAPHASPASKATPRQPYDLVIVGSGSAAFAAAIEASQGGARVAMVERGVVGGTCVNIGCVPS
KTLLRAAEIYFRTRHHPFAGIATQAGPVDLPLLIGQKNELVSRLRYQKYERLVDTYGFDLLRGEGRFLDAHTLQVVDPQN
GEVSRTLEARAFLIATGAAPAVPDVPGLEAVDFLTSTSALDLRRLPESVAVIGAGYIALELGQFFRHLGAQVTIMQRSPE
LLKAYDPEIRDAVRRMLDEHGIEVLTGVRYLGVDQAGGLKRVRLEVAGVERAVEAEALLVATGRRPNTAALQLDRAGVRT
GLRGEVVVDEQLRTSVPHIFAAGDVTMGPQFVYVAAYQGALAARNAVCGAEERVDLRAVPRVTFTTPAIASVGLTEEQAR
AAGHRVRASVLPLETVPRALANRETTGVYKLVADADTGRLLGAHVVAENAGDVIYAATLAVKFGLTIEDLRSTLAPYLTM
AEGLKLAALGFKTEVSNLSCCAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0085 NP_763640.1 dihydrolipoamide dehydrogenase Not tested SCCpbp4 Protein 4e-140 55
merA BAB47642.1 mercuric reductase Not tested Type-III SCCmec Protein 3e-140 55
merA YP_006098387.1 mercuric ion reductase Not tested Tn2411 Protein 2e-70 45
merA AET25397.1 MerA Not tested PAGI-2(C) Protein 1e-70 45
merA AFG30120.1 MerA Not tested PAGI-2 Protein 1e-70 45
merA AGK07079.1 MerA Not tested SGI1 Protein 6e-71 45
merA ABQ57371.1 MerA Not tested SGI1 Protein 6e-71 45
merA AGK07021.1 MerA Not tested SGI1 Protein 6e-71 45
merA AAN62178.1 mercuric (Hg(II)) reductase Not tested PAGI-2(C) Protein 1e-74 44
unnamed ABR13401.1 mercuric reductase Not tested PAGI-5 Protein 6e-72 44
merA ACN81005.1 MerA Hg(II) mercuric ion reductase Not tested AbaR5 Protein 1e-74 41
merA CAJ77060.1 Mercuric ion reductase Not tested AbaR1 Protein 6e-75 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmar_1608 YP_004102444.1 mercuric reductase BAC0651 Protein 2e-140 55
Tmar_1608 YP_004102444.1 mercuric reductase BAC0224 Protein 1e-142 54
Tmar_1608 YP_004102444.1 mercuric reductase BAC0650 Protein 5e-71 43
Tmar_1608 YP_004102444.1 mercuric reductase BAC0653 Protein 2e-72 42
Tmar_1608 YP_004102444.1 mercuric reductase BAC0652 Protein 9e-75 41