Gene Information

Name : Tmar_1587 (Tmar_1587)
Accession : YP_004102423.1
Strain : Thermaerobacter marianensis DSM 12885
Genome accession: NC_014831
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1916560 - 1917267 bp
Length : 708 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR005829: IPR001867; KEGG: mta:Moth_0827 two component transcriptional regulator; PFAM: response regulator receiver; tr

DNA sequence : 
ATGCGCATCCTGGTGGTCGACGACGAGGCTCCGATGCGCGCCTTGCTCCGGCTGTTCCTCGAGCAGCACGGGTTTGCGGT
CTCCGAGGCGGAAGACGGGTATGAGGCATTGGAGCGCGTCCGGACCGAGCGACCGGATCTGGTTCTGCTGGACATCATGC
TGCCGGGCATCGACGGCTGGGCGGTGTGCCGGATCCTCCGGCGGGAGAGCGATGTCCCGGTCATCATGCTGACGGCCCGG
GACGACGTCCGGGACCGGGTCTCCGGTCTCGAAGCCGGGGCGGACGACTACCTCGTCAAGCCCTTTGCAGAAGAAGAACT
GTTGGCCCGCATTCGAGCGGTCCTGCGCCGCACCCCAAAGGTCGAGGGGCGACCGGCCGACCGGGTGATCGTGGGGCCCC
TGCTCATCGACGTGCCGGCCCGGGAGGCATACTGCCATGGACGCCGTTTGAATCTGACGCCGAAGGAGTTCGATCTTTTG
GCCTTGTTGGCACGGCATCCGGGGCAGGTGCTGGACCGCGCGCGGATCATCGAGCGGGTATGGGGCTGGGATTACGACGG
CGACGTGCGCACCGTCGACACCCACGTCAAGACGTTGCGCGCCAAATTGGTCGCAGCCGGCTGTTCCCGGCACCTGATCG
AGACCGTGCGCAGCATCGGGTATCGTTTGAACCCGCACCACGACGGACGTGGTGGGACCATCCCATGA

Protein sequence : 
MRILVVDDEAPMRALLRLFLEQHGFAVSEAEDGYEALERVRTERPDLVLLDIMLPGIDGWAVCRILRRESDVPVIMLTAR
DDVRDRVSGLEAGADDYLVKPFAEEELLARIRAVLRRTPKVEGRPADRVIVGPLLIDVPAREAYCHGRRLNLTPKEFDLL
ALLARHPGQVLDRARIIERVWGWDYDGDVRTVDTHVKTLRAKLVAAGCSRHLIETVRSIGYRLNPHHDGRGGTIP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-37 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmar_1587 YP_004102423.1 transcriptional regulator AE000516.2.gene3505. Protein 6e-41 49
Tmar_1587 YP_004102423.1 transcriptional regulator NC_012469.1.7685629. Protein 6e-42 46
Tmar_1587 YP_004102423.1 transcriptional regulator BAC0125 Protein 2e-42 45
Tmar_1587 YP_004102423.1 transcriptional regulator BAC0197 Protein 2e-39 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_002952.2859905.p0 Protein 3e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_013450.8614421.p0 Protein 2e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_007793.3914279.p0 Protein 2e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_002745.1124361.p0 Protein 2e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_009782.5559369.p0 Protein 2e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_002951.3237708.p0 Protein 2e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_007622.3794472.p0 Protein 3e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_003923.1003749.p0 Protein 2e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_002758.1121668.p0 Protein 2e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator NC_009641.5332272.p0 Protein 2e-44 45
Tmar_1587 YP_004102423.1 transcriptional regulator BAC0083 Protein 8e-42 43
Tmar_1587 YP_004102423.1 transcriptional regulator HE999704.1.gene2815. Protein 4e-43 43
Tmar_1587 YP_004102423.1 transcriptional regulator BAC0638 Protein 6e-34 42
Tmar_1587 YP_004102423.1 transcriptional regulator BAC0347 Protein 6e-38 42
Tmar_1587 YP_004102423.1 transcriptional regulator BAC0111 Protein 6e-41 42
Tmar_1587 YP_004102423.1 transcriptional regulator NC_012469.1.7686381. Protein 2e-39 42
Tmar_1587 YP_004102423.1 transcriptional regulator CP004022.1.gene3215. Protein 1e-30 42
Tmar_1587 YP_004102423.1 transcriptional regulator CP001918.1.gene3444. Protein 3e-33 42
Tmar_1587 YP_004102423.1 transcriptional regulator CP000647.1.gene2531. Protein 1e-33 42
Tmar_1587 YP_004102423.1 transcriptional regulator NC_010400.5986590.p0 Protein 1e-34 41
Tmar_1587 YP_004102423.1 transcriptional regulator NC_011595.7057856.p0 Protein 1e-35 41
Tmar_1587 YP_004102423.1 transcriptional regulator NC_010410.6002989.p0 Protein 1e-35 41
Tmar_1587 YP_004102423.1 transcriptional regulator FJ349556.1.orf0.gene Protein 5e-38 41
Tmar_1587 YP_004102423.1 transcriptional regulator CP001138.1.gene4273. Protein 1e-26 41
Tmar_1587 YP_004102423.1 transcriptional regulator NC_002695.1.915041.p Protein 2e-27 41
Tmar_1587 YP_004102423.1 transcriptional regulator BAC0533 Protein 3e-26 41
Tmar_1587 YP_004102423.1 transcriptional regulator CP000034.1.gene3834. Protein 2e-27 41
Tmar_1587 YP_004102423.1 transcriptional regulator CP000647.1.gene4257. Protein 3e-26 41
Tmar_1587 YP_004102423.1 transcriptional regulator CP001485.1.gene721.p Protein 4e-34 41
Tmar_1587 YP_004102423.1 transcriptional regulator BAC0596 Protein 5e-34 41
Tmar_1587 YP_004102423.1 transcriptional regulator CP001138.1.gene2239. Protein 5e-34 41
Tmar_1587 YP_004102423.1 transcriptional regulator BAC0039 Protein 2e-34 41
Tmar_1587 YP_004102423.1 transcriptional regulator CP000034.1.gene2186. Protein 2e-34 41
Tmar_1587 YP_004102423.1 transcriptional regulator NC_002695.1.916589.p Protein 2e-34 41
Tmar_1587 YP_004102423.1 transcriptional regulator CP001918.1.gene5135. Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmar_1587 YP_004102423.1 transcriptional regulator VFG1389 Protein 4e-40 50
Tmar_1587 YP_004102423.1 transcriptional regulator VFG1390 Protein 4e-43 49
Tmar_1587 YP_004102423.1 transcriptional regulator VFG0596 Protein 2e-37 44
Tmar_1587 YP_004102423.1 transcriptional regulator VFG1386 Protein 5e-40 42