Gene Information

Name : Tmar_1300 (Tmar_1300)
Accession : YP_004102140.1
Strain : Thermaerobacter marianensis DSM 12885
Genome accession: NC_014831
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1556433 - 1557281 bp
Length : 849 bp
Strand : -
Note : COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR017871: IPR003439: IPR003593; KEGG: sth:STH1933 iron ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: Iron ABC transporter A

DNA sequence : 
GTGGGCTTTGCCCTGGAGGTGCGGGGCGTGCGGGTGGGGTACGCGGCCGACCCCGTGCTGGACGGCGTGACCTTGGAGGT
CCACCGCGGGGAGTGGCTGGCCGTGGCCGGCCCCAACGGATCGGGCAAGACCACCCTGCTGCGCGCCCTGACGGGTTTCC
TCGAGCCCTGGGGTGGCGCGGTGTACCTGGAAGGGACGGCGCTGTCCGCTTGGCGCCCTTCGCAGCGGGCGCGGCGCATG
GCCGTGGCCGGCGTGGAGCCGGGACCCGTCACCGGGCTGACCGTGGCGGAGTACGTGGCGTTGGGGCGCACACCGCATCT
TCAAGGGATGTGGTCCTGGGAAGGTCCCCGGGACCGGGAGGTGGTGGCCCGGGCCCTCGCCTGGGTAGGCCTTGATCCCC
TGGCGGACCGGCCCCTGGAGACCTTGAGCGCCGGCCAGCGGCAGAAGGCGGTGCTGGCCCGGGCTCTGGCCCAAGAGCCG
GTGGTCCTGCTGCTGGACGAACCCACCAGCCACCTGGACCTGCGCCACCAGGTGGAGATCATGGACCTGCTGGACGGGCT
GCGGCGTGGCCTGGGTCTCACCCTGGTGGCCGTGCTGCACGACCTGAACCTGGCCGCCCTCTACTGCCAGCGACTGGTGC
TGTTGCAGGACGGCCGGGTGGCGGCGGCGGGGGAGCCCGCCCAGGTGATCCGGGCCGACGTGCTCCGCCGGGTCTACGGC
TGCCCGGTGCTGGTCGTACCCCACCCCCGGCTGGGCGTGCCCCAGGTCGCCCTGCTGCCGGGCGTTCCGCCGGGGCCGGA
GGCGGGTTCGTGCCGTGCGGACGAACCCGCCGCGGCAGCGGGTGCCTGA

Protein sequence : 
MGFALEVRGVRVGYAADPVLDGVTLEVHRGEWLAVAGPNGSGKTTLLRALTGFLEPWGGAVYLEGTALSAWRPSQRARRM
AVAGVEPGPVTGLTVAEYVALGRTPHLQGMWSWEGPRDREVVARALAWVGLDPLADRPLETLSAGQRQKAVLARALAQEP
VVLLLDEPTSHLDLRHQVEIMDLLDGLRRGLGLTLVAVLHDLNLAALYCQRLVLLQDGRVAAAGEPAQVIRADVLRRVYG
CPVLVVPHPRLGVPQVALLPGVPPGPEAGSCRADEPAAAAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-32 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmar_1300 YP_004102140.1 ABC transporter BAC0164 Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmar_1300 YP_004102140.1 ABC transporter VFG1042 Protein 1e-34 41