Gene Information

Name : Tmar_1261 (Tmar_1261)
Accession : YP_004102101.1
Strain : Thermaerobacter marianensis DSM 12885
Genome accession: NC_014831
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1509752 - 1510759 bp
Length : 1008 bp
Strand : -
Note : COGs: COG0181 porphobilinogen deaminase; InterPro IPR000860; KEGG: pca:Pcar_3063 porphobilinogen deaminase; PFAM: porphobilinogen deaminase; SPTR: porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase, C-terminal d

DNA sequence : 
TTGACCGCTCCGGTGGTCCGCATCGGCACCCGGGCCAGTGCCCTGGCCCGCATCCAGGCGCAGTGGGTGGCCCGTGAATT
GCAGCGCCACCACCCGGGCTTGCAGGTGGAGCTGGTCCCCGTGACCACCCACGGCGACCGGCACCGGGCCCGGCCCCTCT
ACACCCTGGACACGCCCGGTGCCTTCGTCAAGGAGCTGGAAGAGGCCCTGCGGGCCGGGATCATCGACCTGGCCGTTCAC
AGCGCCAAGGATGTGCCGACGCGCCTGCCGGAGGGACTCGAGCTGGCCGCTTTCCCCCAGCGGGAAGACCCTGGCGACGC
GCTGGTGCTGCCGCGGTCGCAGGAGGGCCTCGGACCGAACGGTAGAGACGCAGGGCGTGGGGCCGGCATGACGGCGCTCG
AACTCTTGCCCCCGGGCGCCCGGGTGGGCACCAGCAGCCTGCGCCGCCAGGCGTGGTTGCGGGCCCGGCGGCCCGACCTC
AAGGTCGAACCGGCCCGGGGCAACCTGGACACCCGGCTGCGACGCCTGGATGAAGGGGCCTGGGATGCCCTGGTCCTGGC
TGCCGCCGGATTGCGGCGCCTGGGCGTGGGCCACCGGATCACGGCCGCCATTCCGCCCCGCGCCTTGTTGCCGGCCCCCG
GCCAGGGCGCCTTGGCCGTGGAGATCCGCGCCAGCGACGACGCCACCCGCCGGCTGGTGCAGGTCCTGGACCGGCCCGAG
GTCGCCCTGGCGGTGCGGGCGGAACGGGCGTTTCTCGCCGAGCTGGGCGGCACCTGCCGCATCCCCTTGGGGGCCTGGGC
CCGGCTGGAGGGCCCGCGGCTCCGCCTGGCCGGCATGGTGGCCGCCCCGGACGGCGACCCGTGGCTGGAAGAGGAAGTCG
AAGGGCCGGCCACGGACCCCGAGGCCGTGGGCCGGGAGCTGGCCGAGCGGCTGCGGGCCCGCGGGGCCGAATCGGTGCTG
GCGGCCGCCGGCGCCGCTCCGGGGCGCGGTGCCGCCGGCCGGGCGTAA

Protein sequence : 
MTAPVVRIGTRASALARIQAQWVARELQRHHPGLQVELVPVTTHGDRHRARPLYTLDTPGAFVKELEEALRAGIIDLAVH
SAKDVPTRLPEGLELAAFPQREDPGDALVLPRSQEGLGPNGRDAGRGAGMTALELLPPGARVGTSSLRRQAWLRARRPDL
KVEPARGNLDTRLRRLDEGAWDALVLAAAGLRRLGVGHRITAAIPPRALLPAPGQGALAVEIRASDDATRRLVQVLDRPE
VALAVRAERAFLAELGGTCRIPLGAWARLEGPRLRLAGMVAAPDGDPWLEEEVEGPATDPEAVGRELAERLRARGAESVL
AAAGAAPGRGAAGRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-35 46
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-35 46