|
Name : Tmar_0981 (Tmar_0981) Accession : YP_004101821.1 Strain : Thermaerobacter marianensis DSM 12885 Genome accession: NC_014831 Putative virulence/resistance : Virulence Product : type III secretion system ATPase, FliI/YscN Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.15 Position : 1193671 - 1195059 bp Length : 1389 bp Strand : + Note : COGs: COG1157 flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR003593: IPR005714: IPR020003: IPR004100: IPR 000194; KEGG: hmo:HM1_2224 flagellar protein export ATPase FliI, PFAM: H+transporting two-sector ATPase alpha/subunit beta cen DNA sequence : ATGGCCGTGACCGCGGCGGACCTGCAGGCGGCAGCCCCGCGCATGGACGAAGCGCTTCCGGACGGCCCGGACTCCCTCCT GGACTGGTCGCGGCTGCAGGCGGCGCTGGAAACCGCCGACCCCCGGCCGACCCAGGGCTGGGTCGAGCAGGTGGTGGGCC TGGCGGTGGAGGCCCGGGGACCGGTGAGCTCCCTGGGGGAGCTCTGCTGGATCCACCGGGCCGGACTGCCGCCCGTGCCG GCCGAGGTGGTGGGATTCCGCGGCCCCCACACCCTGCTGATGCCCCTGGGCGACGCGCGGGCCATCCGGCCCGGCAGCCT GGTGGAAGCCACGGGCCGCGGCTTCACCGTGGGCGTGGGCGAGGGCCTGCTGGGCCGCGTCCTGGACGGCCTGGGCCGGC CGCTGGACGGGCAGGGACCGGTGGCCGTGGAGGCGTGGTACCCCGCCGAAGGCGAGCCGCCGCCGCCGCTGGCCCGCCAG CCGATCCGCGAGCCCCTGCCCGTGGGCGTGCGGTCCATCGACGCCCTGCTGACCTGCGGCCGGGGCCAGCGGGTCGGCAT CTTCGCCGGCAGCGGGGTGGGCAAGAGCACGCTCCTGGCCATGATGACCCGCCACACCGCCGCCGACGTGGTGGTGGTGG CCCTGATCGGCGAGCGGAACCGCGAAGTCCGCGACTTCGTGGACCACCACCTGGCGGGCAGCCGTCGCCGCACGGTGGTG GTGGCGGCCACCGCCGACCGGCCCGCCCTGGTGCGGATCAAGGCCGCCCAGGTGGCCACGGCCATCGCCGAGTTCTTCCG CGACCGGGGCCGCCACGTGCTGCTGGTGATGGACTCCGTCACCCGCTACGCCATGGCCCTGCGGGAGGTGGGGCTGGCCG TGGGCGAGCCGCCGGCCACCCGGGGCTACCCGCCGTCGGTCTTTGCGGCCCTGCCGCGGCTGCTGGAGCGGGCCGGGACC GGCCCCCGGGGCAGCATCACCGGGTTCTACACCGTGCTGGTGGACGGCGACGACTTGAACGAGCCCATCGCCGACGCGGT GCGGGGCACTCTGGACGGGCACATCGTCCTGTCGCGGCAACTGGCCGAGGAAGGGCAGTTCCCCGCGGTGGACGTCCTGG CCAGCGTCAGCCGGCTGATGCCCGAGCTGGTGGAACCGGCCCACTGGGCGGCCGCCCAGCGGTTGCGGCGGTGGCTGGGG GCGTACCGGGAGGCCCGGGATCTGCTGGAGATCGGCGCCTACCAGCGAGGCAGCAACCCGGACGTGGACCGGGCCCTGGA GCGGATGCCGGCCATTCGCGCCTTCCTGACCCAAGGCCGCGACGAGGCGTCGCCCTTCGCCGAGGCCGTGGCCCGGTTGC AGGAGGTGGCCGGCGGTGCGGTGACCTAG Protein sequence : MAVTAADLQAAAPRMDEALPDGPDSLLDWSRLQAALETADPRPTQGWVEQVVGLAVEARGPVSSLGELCWIHRAGLPPVP AEVVGFRGPHTLLMPLGDARAIRPGSLVEATGRGFTVGVGEGLLGRVLDGLGRPLDGQGPVAVEAWYPAEGEPPPPLARQ PIREPLPVGVRSIDALLTCGRGQRVGIFAGSGVGKSTLLAMMTRHTAADVVVVALIGERNREVRDFVDHHLAGSRRRTVV VAATADRPALVRIKAAQVATAIAEFFRDRGRHVLLVMDSVTRYAMALREVGLAVGEPPATRGYPPSVFAALPRLLERAGT GPRGSITGFYTVLVDGDDLNEPIADAVRGTLDGHIVLSRQLAEEGQFPAVDVLASVSRLMPELVEPAHWAAAQRLRRWLG AYREARDLLEIGAYQRGSNPDVDRALERMPAIRAFLTQGRDEASPFAEAVARLQEVAGGAVT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 2e-93 | 53 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 9e-91 | 53 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 7e-91 | 53 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 7e-91 | 53 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 6e-90 | 53 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 2e-84 | 52 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 3e-84 | 52 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 1e-84 | 52 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-84 | 52 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 7e-85 | 52 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-90 | 52 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 8e-91 | 52 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 6e-90 | 51 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 4e-90 | 51 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-87 | 51 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-87 | 51 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-68 | 47 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 1e-72 | 46 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 9e-73 | 46 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 3e-73 | 46 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 6e-70 | 46 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 7e-70 | 46 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 3e-71 | 45 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 5e-77 | 45 |
| hrcN | ABQ88354.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-67 | 45 |
| hrpJ4 | AAA81942.1 | HrpJ4 | Virulence | Hrp PAI | Protein | 1e-67 | 45 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 4e-71 | 44 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-76 | 43 |
| invC | AAS66861.1 | InvC | Not tested | SSR-2 | Protein | 1e-69 | 43 |
| ysaN | AAS66842.1 | YsaN | Not tested | SSR-1 | Protein | 2e-77 | 41 |
| spaI | NP_806497.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 2e-71 | 41 |
| invC | NP_461815.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 2e-71 | 41 |
| invC | YP_217813.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 2e-71 | 41 |
| spaI | NP_457288.1 | secretory apparatus ATP synthase (associated with virulence) | Virulence | SPI-1 | Protein | 2e-71 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG0192 | Protein | 7e-99 | 54 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG1254 | Protein | 3e-95 | 54 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG0390 | Protein | 2e-94 | 53 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG0515 | Protein | 1e-84 | 52 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG0048 | Protein | 2e-95 | 49 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG2331 | Protein | 2e-85 | 49 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG2499 | Protein | 3e-83 | 49 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG2144 | Protein | 1e-93 | 47 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG1778 | Protein | 4e-77 | 44 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG1008 | Protein | 6e-72 | 42 |
| Tmar_0981 | YP_004101821.1 | type III secretion system ATPase, FliI/YscN | VFG0555 | Protein | 1e-71 | 41 |
