Gene Information

Name : Intca_0829 (Intca_0829)
Accession : YP_004098088.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Unknown
Product : L-lactate transport
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1620
EC number : -
Position : 907056 - 908795 bp
Length : 1740 bp
Strand : +
Note : COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: msm:MSMEG_6826 L-lactate permease; PFAM: L-lactate permease; SPTR: L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; TIGRFAM: L-lactate transport

DNA sequence :
ATGTATCGCCCAGTCCTCGATTCGGTAGCCGGATCGATCTTCCTCACGGCCCTCGTGGCCATGCTTCCACTGGTCACCCT
GTTCGTGCTGCTCGGCGTCCTGCGCATCAGCGCGTGGAAGGCCGCACTCGTCTCGTTGCTCGTCTCGATCCTCGTCGCGA
TCCTTGCGTACTCCATGCCCGCCGGACAGGCGATCATGGCCGGAGCGGAGGGGGCCGCGTTCGGGTTCTTCCCCATCCTC
TGGATCGTCATCAACGCCATCTGGCTCTACAACATGACGGTGGTGACCGGGCACTTCGACGTCCTGCGCCGCTCGTTCGC
GAAGGTGAGTGACGACCAGCGCATCCAGGCCGTCATCATCGCGTTCTGCTTCGGCGCCCTGCTCGAGGCGCTCGCGGGCT
TCGGCACGCCCGTCGCGATCACGAGCGTCATGCTCATTGCCCTCGGCTTCCGGCCGATGAAGGCCGCCGTGGTCGCCCTC
GTGGCGAACACCGCCCCGGTGGCGTTCGGCGCCCTGGCCGTGCCGATCACGACCCTCGCGACGGTGACGGGCCTGCCCGA
GCACACCCTCTCGCAGATGGTCGGACGCCAGACCCCCCTCCTCGGCATCTTCGTGCCGATGGCCCTCGTCTACATCATCG
ACCGCGGCCGCGGGGTCCGGGCCACCCTGCCCGCGACGCTCACGGTCGGCATCAGCTTCGCCATCGCCCAGTTCGCGACG
TCGAACTACCTGTCGACGCAGCTGACCGACATCGTGGCCTCGCTCGTCGGCGCCGCATCCGTCGTCCTCCTCCTGCGCTT
CTGGCGGCCCGCCGCCCCGTACGTGGAGACCGAGGAGCCGGCCGTCGCGCGGGCCCACGTCTCGCGGCGCGCCGCGGAGC
ACGAGGCGGGCCTGATAAGCGGCACGCCCGCGGCGCATGCTGGTGGCTCGGACCACCCGATCGGCGCAGGCACGGGGACT
GCGCAGGAGCTGGCCGAGCGCGACCGCGGTCACGTCGACACCACCTCCGACGTCTTCAAGGCCTACGCGCCCTACCTCAT
CATCATCGCGATCTTCAGCCTCAGCCAGCTCCCGGGCATCAAGGACGCACTCGCCGCGCCGGGCACCCAGTTCAAGTGGC
CCGGCCTGGACCTGCAGACCCCTTCGGGCAAGCCGTCCACGCTCCCGACGTTCAAGTTCGGGTGGCTCAACGCAGCCGGC
ACGCTGATGCTCATCGCCGGCCTCGTGACGATCCCCGTCATCGGCATCTCCCTCAGCAAGGCGTTCCGGGCCTACCTCGA
CACCTACCGACAGCTCGCGGCAGCCATCGTCACCGTCATGGCCGTCCTCGGCCTCGCCTACGTCATGAACGCCTCCGGTC
AGACCGCGACGCTCGGCACGTGGATGGCCGGTGCTGGGGCGATCTTCGCGATCATCTCCCCGATCCTCGGGTGGCTCGGC
GTGGCCGTCACCGGCTCGGACACGTCGTCCAACTCGCTGTTCGGAGCGCTGCAGGTGTCGGCGGCCGCCAAGACCGGGCT
CGACCCCATCCTCATGGCGGCGGCCAACTCCTCCGGTGGTGTCCTCGGCAAGATGATCTCGCCGCAGAACCTCGCGATCG
CTGCGGCGGCGGTGGGATTGTCCGGCCGGGAGGGTGACATCTTCCGCAAGGTGGTCGGCTGGAGCGTCGGGTTCCTCGTC
TTCATGTGCGTGCTCGTCTATCTCCAGTCCACGCCCGTGCTCTCGTGGATGGTCCCCTGA

Protein sequence :
MYRPVLDSVAGSIFLTALVAMLPLVTLFVLLGVLRISAWKAALVSLLVSILVAILAYSMPAGQAIMAGAEGAAFGFFPIL
WIVINAIWLYNMTVVTGHFDVLRRSFAKVSDDQRIQAVIIAFCFGALLEALAGFGTPVAITSVMLIALGFRPMKAAVVAL
VANTAPVAFGALAVPITTLATVTGLPEHTLSQMVGRQTPLLGIFVPMALVYIIDRGRGVRATLPATLTVGISFAIAQFAT
SNYLSTQLTDIVASLVGAASVVLLLRFWRPAAPYVETEEPAVARAHVSRRAAEHEAGLISGTPAAHAGGSDHPIGAGTGT
AQELAERDRGHVDTTSDVFKAYAPYLIIIAIFSLSQLPGIKDALAAPGTQFKWPGLDLQTPSGKPSTLPTFKFGWLNAAG
TLMLIAGLVTIPVIGISLSKAFRAYLDTYRQLAAAIVTVMAVLGLAYVMNASGQTATLGTWMAGAGAIFAIISPILGWLG
VAVTGSDTSSNSLFGALQVSAAAKTGLDPILMAAANSSGGVLGKMISPQNLAIAAAAVGLSGREGDIFRKVVGWSVGFLV
FMCVLVYLQSTPVLSWMVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcA CAE85240.1 GlcA protein, putative glycolate permease Not tested PAI V 536 Protein 1e-65 41