Gene Information

Name : Intca_0421 (Intca_0421)
Accession : YP_004097696.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 456490 - 457497 bp
Length : 1008 bp
Strand : -
Note : COGs: COG0078 ornithine carbamoyltransferase; InterPro IPR006132: IPR006131: IPR002292: IPR006130; KEGG: sma:SAV_2319 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltrans

DNA sequence :
ATGACCGTGGCATCCCTCTTCGGCCGGAACGTCCTCAAGGAGTCCGACCTCACCCCCGACGAGTTCCGCGCCCTGCTCGA
CCTCGCGGCGGATCTCAAGGCGGCCAAGCGTGAGCGCCGTGAGCAGCGTCGCCTCGCCGGGCTCAACATCGCGCTGCTCT
TCGAGAAGACCTCGACCCGCACGCGGTGCGCCTTCGAGGTCGCTGCCGCGGACCAGGGCGCGAGCACGACCTACCTCGAT
CCGGCCGGCTCGCAGATGGGCCACAAGGAGTCGATCAAGGACACCGCCCGTGTGCTCGGCCGCTACTACGACGGCATCGA
GTACCGCGGCGCAGGGCACGACGTCGTCGAGACGCTGGGGGCGTGGGCCGGTGTCCCCGTGTGGAACGGCCTGACGGACG
ACTGGCACCCGACGCAGTCGCTCTGTGACGCCCTGACGATGCGCGAGCACGCGGCGAAGCCGGATTCCGAGATCGCCTTC
GCCTACGTCGGCGACGCCCGCTTCAACATGGGCAACTCGCTCCTCGTGATGGGGGCGATGCTCGGGATGGACGTCCGCAT
CGCCGCGCCGCGCTCCTTGTGGCCGTCGGAGGCTGTTGTCGCCCAAGCGAAGTCGTATGCCGCTGAGTCCGGTTCCCGGG
TCACGCTCACCGAGGACGTGGCTGAGGGGATCGCCGGTGTCGACTTCGTGCACACCGACGTGTGGGTGTCCATGGGGGAG
GCGAAGGACGTATGGGCCGAACGGATCCGGCTCCTCACCCCCTACCAGGTCAACGCCGAGCTGCTCCAGCTCACCGGCAA
CCGAGACGTGCGGTTCATGCACTGCCTGCCCGCGTTCCACGACCTGGAGACGAAGGTCGGCCGGGACGTCCACGCGGAGT
TCGGACGCAAGGAGCTGGAGGTGACCGACGACGTCTTCGAGTCCGAGGCGTCGATCGTCTTCGACCAGGCGGAGAACCGG
ATGCACACCATCAAGGCGCTCCTCGTCGCCACCCTCGCGCGCCCCTGA

Protein sequence :
MTVASLFGRNVLKESDLTPDEFRALLDLAADLKAAKRERREQRRLAGLNIALLFEKTSTRTRCAFEVAAADQGASTTYLD
PAGSQMGHKESIKDTARVLGRYYDGIEYRGAGHDVVETLGAWAGVPVWNGLTDDWHPTQSLCDALTMREHAAKPDSEIAF
AYVGDARFNMGNSLLVMGAMLGMDVRIAAPRSLWPSEAVVAQAKSYAAESGSRVTLTEDVAEGIAGVDFVHTDVWVSMGE
AKDVWAERIRLLTPYQVNAELLQLTGNRDVRFMHCLPAFHDLETKVGRDVHAEFGRKELEVTDDVFESEASIVFDQAENR
MHTIKALLVATLARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-81 58
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-81 58
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-81 58
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-81 58
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-81 58
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-81 58
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 4e-78 57