Gene Information

Name : Intca_0379 (Intca_0379)
Accession : YP_004097655.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Unknown
Product : 2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : 1.1.1.-
Position : 409036 - 409782 bp
Length : 747 bp
Strand : -
Note : COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198: IPR020904: IPR002347; KEGG: nml:Namu_0877 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/r

DNA sequence :
ATGAACAGGCTCGAAGGCAAGATCGCCATCGTCACGGGCGCCGCCCGCGGACTCGGCCGCGGCATCGCCGAGCGGCTCGC
CGCCGAAGGCGCCGTCGTCGTCGTCACCGACGTCAACGCCGACGGCGCCCAGCAGACCGCCACCGAGCTCGGCGGCTCCG
CCCTGGGGCTCGGCTGCGACGTGTCCGACTACGGTTCCGTCGCCGCGATGGTCGCCGACGTGAAGGACCGGTTCGGCCGC
GTCGACGTGCTCGTCAACAACGCCGGCTGGGACAAGGCCGCGCCGTTCCTCGACCTCGACCAGGACCTCTGGCCGAAGAT
CATCGGGATCAACCTCTACGGCGTGCTCAACACGATGAAGGCCGTCCTGCCGATCATGGCGGAGCAGGGCTCCGGGTCGG
TCGTCAACATCAGCAGCGACGCCGGCCGGGTCGGCTCGTCCGGCGAGGCGGTCTACTCGGCGGCCAAGGGCGGTGTCATC
GCCTTCACGAAGTCGACGGCGCGGGAGATGGCCCGCAAGCAGGTGCGCGTCAACGTCATCTGTCCCGGCCCGTCCGACAC
GCAGCTCTTCGCCGAGTTCGCCGGCGACAACCAGGGCCTGCGCGACGCCCTGACCAAGGCCATCCCGCTGCGCCGCCTCG
GCCAGCCCTCCGACGTCGCGGGCGCAGTCGCCTACTTCGCCTCCGATGACTCCGTATACGTGACGGGCCAGACGCTGAGC
ATCAGCGGCGGCCTGACCATGAGCTGA

Protein sequence :
MNRLEGKIAIVTGAARGLGRGIAERLAAEGAVVVVTDVNADGAQQTATELGGSALGLGCDVSDYGSVAAMVADVKDRFGR
VDVLVNNAGWDKAAPFLDLDQDLWPKIIGINLYGVLNTMKAVLPIMAEQGSGSVVNISSDAGRVGSSGEAVYSAAKGGVI
AFTKSTAREMARKQVRVNVICPGPSDTQLFAEFAGDNQGLRDALTKAIPLRRLGQPSDVAGAVAYFASDDSVYVTGQTLS
ISGGLTMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 4e-36 44
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-34 43
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 43
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 8e-35 43