Gene Information

Name : Intca_3543 (Intca_3543)
Accession : YP_004100744.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Unknown
Product : alkylhydroperoxidase
Function : -
COG functional category : S : Function unknown
COG ID : COG0599
EC number : -
Position : 3909425 - 3909796 bp
Length : 372 bp
Strand : +
Note : COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR003779: IPR004675; KEGG: nca:Noca_3748 alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase like protein, AhpD family; TIGRFAM: alkylhydroper

DNA sequence :
ATGACCGACACCGTTGCCCCGCAGACGAACCACCCGCACGGGAAGCAGGTCCTCCAGGACGTCGCTCCCCTGAGCCGGTC
CCTGCGCCAGGCCATCCCCGACGTCTATGCGGGCTTCAGCGAGCTGCACAAGGCCGCGCTCGCACCCGGAGCCCTCGACA
CGAAGACCAAGGAGCTCATCGCCCTGGCCATCGCGGTGGCCGAGGAGTGCGACGGGTGCATCGCCTCGCACGCCCGCGGC
GCCGCCCGGGCCGGCGCGAACCGGCAGGAGGTCGCCGAGGCGATCGGTGTCACGATCCTCATGACGGGCGGCCCCGGCAC
GGTCTACGGTCCCCGCGCCTACGCCGCCTTCGAGGACTTCGTCGAGGGCTGA

Protein sequence :
MTDTVAPQTNHPHGKQVLQDVAPLSRSLRQAIPDVYAGFSELHKAALAPGALDTKTKELIALAIAVAEECDGCIASHARG
AARAGANRQEVAEAIGVTILMTGGPGTVYGPRAYAAFEDFVEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C32 AAN62125.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 1e-14 52