Gene Information

Name : Intca_3450 (Intca_3450)
Accession : YP_004100656.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transporters inner membrane component
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 3823943 - 3824869 bp
Length : 927 bp
Strand : -
Note : COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: stp:Strop_3821 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; S

DNA sequence : 
ATGAGTGACCTGTTACCATCCGCCACCGCGGACCAGCCCGCCCTCCAGGGGCCCACCTCGGAGTCGACGGGGACCTCGGG
CGGGAACGCCAGCCTGTGGAGCGACGCCCGCAAGCAGCTCATCCGCAACCCGATCTTCGTCCTGTCGTCCCTCTACATCC
TCGTCGTGGGCTCGATGGCGATCTTCCCGACGTTGTGGACCGACCAGGACCCTCGGGACTGCCTGATCAGTCGGAGCCGG
CAGCCTCCCCAGGACGGGCACCCGTTCGGGTTCAACATCCTCGGGTGTGACTACTACTCGCATGCCATCTATGGCGCGCA
GCCGTCGCTGTCGATCGCCATCGGTGCCACCGTGGGCATCGTCCTCATCGGCGGCATCCTCGGCCTGCTCGCCGGCTACT
ACGGCGGCTGGGCGGACACGATCATCTCCCGCGTGGTCGACATCTTCCTGTCGCTGCCGTTCCTCCTCGGCGCGCTCGTG
TTCCTCACGGTCGTGAAGGTGCAGAACATCCTCACCATCACGATGGTCCTCGTGATCCTCGGGTGGACGACGATCGCCCG
AGTGATGCGCGGCGCGGTGCTGTCGGCGAAGAACCTCGACTACGTCCTCGCGGCGAGGTCGCTGGGCGCCGGCAACGTCC
GGATCATGCTCCGGCACATCCTGCCCAACGCGGTCGCGCCGGTGACCGTCCTGGCCACCATCGCGCTCGGCAGCTTCGTC
GCCGCCGAGGCGACGCTGACCTTCCTGGGAGTCGGTCTCCAGCCGCCCGAGGAGTCCTGGGGGATCATGATCACCGATCA
CCAGGTGTACTTCCTCGAGGCACCGTGGCTGTTGATCTTCCCGACGACTCTGCTCATCGGCACCGTGCTCAGCTTCATCC
TCATGGGTGACGCGCTGCGCGACGCCCTCGACCCGAAGATGCGGTGA

Protein sequence : 
MSDLLPSATADQPALQGPTSESTGTSGGNASLWSDARKQLIRNPIFVLSSLYILVVGSMAIFPTLWTDQDPRDCLISRSR
QPPQDGHPFGFNILGCDYYSHAIYGAQPSLSIAIGATVGIVLIGGILGLLAGYYGGWADTIISRVVDIFLSLPFLLGALV
FLTVVKVQNILTITMVLVILGWTTIARVMRGAVLSAKNLDYVLAARSLGAGNVRIMLRHILPNAVAPVTVLATIALGSFV
AAEATLTFLGVGLQPPEESWGIMITDHQVYFLEAPWLLIFPTTLLIGTVLSFILMGDALRDALDPKMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 7e-48 49