Gene Information

Name : Intca_3416 (Intca_3416)
Accession : YP_004100623.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.5
Position : 3781358 - 3781849 bp
Length : 492 bp
Strand : +
Note : COGs: COG2077 peroxiredoxin; InterPro IPR013740: IPR017936: IPR018219; KEGG: krh:KRH_08020 thiol peroxidase; PFAM: Redoxin domain protein; SPTR: thiol peroxidase; PFAM: Redoxin

DNA sequence : 
ATGGCTACCACTGCACTGCGCGGCACCCCCGTCGAGACGACCGGAGACCTGCCCACCGTCGGCGACGTGGCACCGGACTT
CGTCCTCGCGGGCGCCGACCTGACCGACGTCCCCCTCAAGCACGGCACGCGGCTCGTGCTCAACATCTTCCCGAGCATCG
ACACCGGCGTCTGCGCCCAGAGCGTCCGCCGCTTCAACGAGCTCGCCGGCGACCTCGACAACACCGAGGTCATCTGCGCG
TCCGAGGACCTGCCCTTCGCGCTCAAGCGCTTCTGCGGCGCCGAGGGCATCGACAACGTCGTCGCGGCCTCGAGCTTCCG
GTCGACGTTCGGCGAGGACTACGGGGTCACCCTCGCGGAGGGCACGATGCGGGGCCTCCTCGCCCGGTCCGTCGTCGTCA
TCGACGAGGAGGGCACCGTGCTCCACACCGAGCTCGTGCCCGACATCTCGCAGGAGCCGGACTACGACGCGGCCCTCGCC
GCCCTCAGCTGA

Protein sequence : 
MATTALRGTPVETTGDLPTVGDVAPDFVLAGADLTDVPLKHGTRLVLNIFPSIDTGVCAQSVRRFNELAGDLDNTEVICA
SEDLPFALKRFCGAEGIDNVVAASSFRSTFGEDYGVTLAEGTMRGLLARSVVVIDEEGTVLHTELVPDISQEPDYDAALA
ALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-32 47
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-32 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-32 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-33 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Intca_3416 YP_004100623.1 thiol peroxidase VFG0087 Protein 3e-33 47