Gene Information

Name : Intca_3408 (Intca_3408)
Accession : YP_004100615.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : 1.11.1.6
Position : 3771967 - 3773547 bp
Length : 1581 bp
Strand : +
Note : COGs: COG0753 catalase; InterPro IPR018028: IPR010582: IPR011614: IPR002226; KEGG: sco:SCO0379 catalase; PFAM: catalase related subgroup; catalase domain protein; PRIAM: catalase; SPTR: catalase; PFAM: catalase; catalase-related immune-responsive

DNA sequence :
ATGTCTGTCGAAGGACCCCGCCAGGACCCGGGCAATACCAAGCCGCTGACCACGGTCGCCGGCGCACCCGTCTGGGACGG
CGAGAACAGCGTCACGGCCGGCCCGCGCGGCCCCATGCTCCTCCAGGACGTCTGGTTCCTGGAGAAGCTCGCCCACTTCG
ACCGGGAGGTCATCCCGGAACGGCGCATGCACGCGAAGGGCTCGGGCGCCTACGGCACGTTCACGGTGACGAACGACATC
ACCCAGTACTCCTGCGCCAAGATCTTCGCCGAGGTCGGCAAGCAGACCGAGATGTTCGTCCGCTTCTCCACCGTCGCCGG
TGAGCGCGGCGCGGCTGACGCCGAGCGCGACATCCGCGGCTTCGCGGTGAAGTTCTACACCGAGGAGGGCAACTGGGACA
TCGTCGGCAACAACACCCCGGTCTTCTTCTTCCGCGACCCGCTGCAGTTCCCCGACCTCAACCACGCGGTCAAGCGCGAC
CCCAAGACCAACCTGCGCAGCGCGGAGAACAACTGGGACTTCTGGACCAACCTCCCCGAGGCGCTGCACCAGGTCACCAT
CGTCATGTCCGACCGCGGCATCCCGGCGAGCTACCGCCACATGCACGGCTTCGGCTCGCACACGTACTCGTTCTACAACG
CCGAGGGGGAGCGCTTCTGGGTCAAGTTCCACCACCGCACCCAGCAGGGCATCAAGAACCTCACCGACGCCGAGTCCACG
GCCCTCATCGGCGAGGACCGCGAGTCGCACCAGCGGGACCTCTTCGAGGCGATCGAGAACGGCGACTTCCCGAAGTGGAA
GCTCTACGTCCAGGTGATGCCCGAGGCCGACGCGCTCAAGGTCCCCTACCACCCGTTCGACCTGACCAAGGTGTGGCCGA
AGGGTGACTACCCGCTCATCGAGGTCGGCGAGTGGGAGCTGAACCGCAACCCGGAGAACTACCACGCCGAGGTCGAGCAG
GCCGCCTTCTCCCCGGCGAACGTCGTGCCGGGCATCAGCTTCTCGCCCGACCGGATGCTGCAGGGGCGGCTCTTCTCCTA
CGGTGACGCGCAGCGCTACCGGCTCGGCGTCAACCACCACCAGATCCCCGTCAACGCCCCCAAGGCGGCCGGCACCGTCA
ACAGCCCGCACCGGGACGGCGCGATGCGGATCGACGCGGGCGCGACCCCGGCCATCACGCCGAACTCCTACGGCCGCTAC
TCGAGCCAGCCGCAGTACCGCGAGCCGGCGTGGCGGATCGACCCCTCCGCGGACCGGTTCAACCACCGCGAGGACGACCA
GGACTACTACACGCAGCCGGGCATCCTCTTCCGCGAGAAGATGACGCCGGAGCAGCAGCAGGCCCTCTTCGAGAACACCG
CCCGGGCGATCTCGGGCGCCTCGAAAGAGACGATCGAGCGCCACATCGCCAACTGCACCAAGGCCGACCCGGCCTACGGC
GCCGGCGTGCGCGCGGCGATCGACGCCCTCAACGCGGCCGCCGCCGAGGCGGACGACGTCGCCAAGGGCGCGGCCAACGC
CAACGCCCCGGTCGACGGTGCCCCGGTGGACCGTTCGGACGACATGGCCGACCTGCTCTGA

Protein sequence :
MSVEGPRQDPGNTKPLTTVAGAPVWDGENSVTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTNDI
TQYSCAKIFAEVGKQTEMFVRFSTVAGERGAADAERDIRGFAVKFYTEEGNWDIVGNNTPVFFFRDPLQFPDLNHAVKRD
PKTNLRSAENNWDFWTNLPEALHQVTIVMSDRGIPASYRHMHGFGSHTYSFYNAEGERFWVKFHHRTQQGIKNLTDAEST
ALIGEDRESHQRDLFEAIENGDFPKWKLYVQVMPEADALKVPYHPFDLTKVWPKGDYPLIEVGEWELNRNPENYHAEVEQ
AAFSPANVVPGISFSPDRMLQGRLFSYGDAQRYRLGVNHHQIPVNAPKAAGTVNSPHRDGAMRIDAGATPAITPNSYGRY
SSQPQYREPAWRIDPSADRFNHREDDQDYYTQPGILFREKMTPEQQQALFENTARAISGASKETIERHIANCTKADPAYG
AGVRAAIDALNAAAAEADDVAKGAANANAPVDGAPVDRSDDMADLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 1e-152 68
katA YP_005126717.1 catalase Not tested Not named Protein 3e-92 47
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 5e-88 44
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 5e-88 44
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 5e-88 44
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 5e-88 44