Gene Information

Name : Intca_0302 (Intca_0302)
Accession : YP_004097584.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 324964 - 327327 bp
Length : 2364 bp
Strand : -
Note : COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017: IPR017900: IPR017896; KEGG: kse:Ksed_26190 Fe-S oxidoreductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: iron-sulphur-binding reductase; PFAM: Cysteine-rich

DNA sequence :
ATGACTGTCCTCCAGATCATCGCGATCGTGATCAGCCTCGCCATCACCGTGGTGGGGGTCGCGCTGCTCACCAAGACGAT
CAACCACTACGTGGCGACCTTCCGGCTCGGCCAGCCGGAGTACCGCGGGGACGACAAGGGGGCCCGGACCGTCACCTTGG
TGCGCGAGTTCCTCGGGCACACCCGGATGTCGCGCCTGCCCGTGGTGGCCATCGCCCACTGGTTCACGATGGTCAGCTTC
GGGATCCTCTTCTTCACCTTGATCAACGCGTTCGGGCAGCTCTTCGAGCCGTCCTGGACGCTGCCCCTCATCGGCCACTT
CCCGCCCTACGAGTGGATCACCGAGTTCTTCGCCTGGACCGGCCTCCTCGGCATCGTCCTGCTGATGGCGATCCGCCAGC
AGAACCACCCGCGCTCCGCAGCCGGCGAGCACGGCCGTCGGAGCCGGTTCTTCGGGTCGACGTGGTGGCAGGCCTACTAC
GTCGAGCTGACCATCCTCGGCGTCACCCTGTGCATCCTCGCCCTGCGCGTGCTCGAGTACGCCCTGGCCAAGGTCGAGGG
CCTCGACACGGCGAGCGCCCTGAACTTCCCGATGACTGCCTGGCTCGGCGAGTCCTTCACCGGTCTGTCCGTCGCGGCGC
TGGAGGGCGCCATCGTCGTCATCGCCACCCTGAAGATCCTCATCTCCATGGCGTGGATGATCACCATCGCGCTCAACCCG
ACGATGGGGGTCGCCTGGCACCGCTTCCTCGCGTTCTTCAACATCTTCTGGAAGCGCCACGCCGACGGGCGCACCTCCCT
GGGCGAGCTGCAGCCGATCCGGGTCAACGGCGAGCCGCTCGACTTCGAGAACGTCGACGACCTCGACGAGGACGCCGCTC
TCGGCGTGGGCAAGATCGAGGACTTCACCTGGAAGGGCCTGCTCGACTTCACGACGTGCACCGAGTGCGGCCGCTGCCAG
AGCCAGTGCCCCGCGTGGAACACCGACAAGCCGCTGTCCCCGAAGCTGCTCGTCATGTCCCTGCGCGATCACGCCCACGC
CAAGGCGCCGTGGCTACAGGCCTCCGAGGAGGTCCGCGCCAAGGGGATCGACGCGGGCTCCTTCTCCGAGAGGACCAAGG
CCGCCGTCGCGGTCGACCAGCTCGTCGGCGAGACCGGGTACGACATCACCGACCCGCTCGGCGCCTACCAGCCGTACGGC
GCTCCGGACGGGGGCGGCGCGGTCATCGACCAGGACGTGCTGTGGTCCTGCACCACGTGCGGCGCCTGCGTCGAGCAGTG
CCCGGTCGACATCGAGCACGTCGACGCGATCGTCGACATGCGCCGCTACAAGAACCTCATCGAGTCGGCATTCCCGTCCG
AGCTCGGCGGCCTGTTCAAGAACCTCGAGAAGAACGCGAACCCCTGGGGTCTCGCCCCGCGGCTGCGGATGGACTGGGCC
AAGGACCTGCCCTTCGACGTGCCACAGGTCGGCGGTTCAGGCAGCTCAGACGTCGAGGCCTTGGAAGATGTCGACTACCT
CTTCTGGGTCGGCTGCGCCGGCGCCTACGAGGACCGGGCCAAGAAGACGACCCGCGCGGTCGCCGAGCTGCTCCACCTGG
CCGACGTGAGGTTCGCCGTCCTCGGCGACGGCGAGGCGTGCACGGGCGACTCGGCTCGGCGCGCCGGCAACGAGTTCCTC
TTCCAGATGCTCGCCCAGCAGAACGTCGAGGTCCTCAACGAGGTCGGCGCGACGAAGATCGTCGTCACCTGCGCGCACTG
CTTCAACACGATCAAGAACGAGTACCCGCAGCTCGGGGGGACCTACGAGGTGCTGCACCACACCCAGCTGCTCAACCGGC
TCGTCCGCGAGAAGCGCCTCACCCCGGTCGCCCGGCCCGGCGACGGGGACGGTCTCGGGATGTCCCGCGCCGGATCGACC
GGATCGAAGGTGACCTACCACGACCCGTGCTACCTCGGCCGGCACAACCAGGTGTACGCGCCGCCGCGCGAGCTGCTCCA
GATCCTGCCCGGCGTCGAGTACGCCGAGATGGAGCGCAGCGGCGAGAAGTCCTTCTGCTGCGGCGCCGGCGGCGCCCGGA
TGTGGATGGAGGAGAAGCTCGGCACCCGGATCAACACCAACCGCACCGAGGAGGCCCTGGCCACCGGAGCCGACCGGATC
GCGATCGGCTGCCCGTTCTGCAAGGTGATGCTCACCGACGGCCTCAACGCCGCCGTCCAGGAAGGCAAGAAGGCCGAGGG
TGAGGTCGAGGTCGTCGACGTCGCCCAGATGCTCCTCGCCGCGGTCCGCCGTGGTGACGGCGGCGCGAGTGTCGAGCAGG
CGCACGCCGTGCCCGACGCACCGACCCCGGAGCCCGCCATCTGA

Protein sequence :
MTVLQIIAIVISLAITVVGVALLTKTINHYVATFRLGQPEYRGDDKGARTVTLVREFLGHTRMSRLPVVAIAHWFTMVSF
GILFFTLINAFGQLFEPSWTLPLIGHFPPYEWITEFFAWTGLLGIVLLMAIRQQNHPRSAAGEHGRRSRFFGSTWWQAYY
VELTILGVTLCILALRVLEYALAKVEGLDTASALNFPMTAWLGESFTGLSVAALEGAIVVIATLKILISMAWMITIALNP
TMGVAWHRFLAFFNIFWKRHADGRTSLGELQPIRVNGEPLDFENVDDLDEDAALGVGKIEDFTWKGLLDFTTCTECGRCQ
SQCPAWNTDKPLSPKLLVMSLRDHAHAKAPWLQASEEVRAKGIDAGSFSERTKAAVAVDQLVGETGYDITDPLGAYQPYG
APDGGGAVIDQDVLWSCTTCGACVEQCPVDIEHVDAIVDMRRYKNLIESAFPSELGGLFKNLEKNANPWGLAPRLRMDWA
KDLPFDVPQVGGSGSSDVEALEDVDYLFWVGCAGAYEDRAKKTTRAVAELLHLADVRFAVLGDGEACTGDSARRAGNEFL
FQMLAQQNVEVLNEVGATKIVVTCAHCFNTIKNEYPQLGGTYEVLHHTQLLNRLVREKRLTPVARPGDGDGLGMSRAGST
GSKVTYHDPCYLGRHNQVYAPPRELLQILPGVEYAEMERSGEKSFCCGAGGARMWMEEKLGTRINTNRTEEALATGADRI
AIGCPFCKVMLTDGLNAAVQEGKKAEGEVEVVDVAQMLLAAVRRGDGGASVEQAHAVPDAPTPEPAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fadF YP_005682164.1 Protein fadF Not tested PiCp 7 Protein 8e-146 47
fadF YP_005684256.1 Protein fadF Not tested PiCp 7 Protein 8e-146 47
fadF YP_005686348.1 Protein fadF Not tested PiCp 7 Protein 8e-146 47
cpfrc_01915 YP_003784315.1 hypothetical protein Not tested PiCp 7 Protein 8e-146 47