Gene Information

Name : Intca_2288 (Intca_2288)
Accession : YP_004099524.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 2555842 - 2556216 bp
Length : 375 bp
Strand : -
Note : COGs: COG0335 ribosomal protein L19; InterPro IPR001857: IPR018257; KEGG: gob:Gobs_4003 ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; TIGRFAM: ribosomal pr

DNA sequence :
ATGCACACGTTTGACGCGATCGACGCCGCGTCGCTGCGCTCGGACATTCCCGAGTTCCGCGCCGGTGACACGCTCAAGGT
CCACGTCAAGGTCGTCGAGGGCACCCGCTCCCGGGTCCAGGTCTTCCAAGGCGTCGTCATCCGCCGCCACGGCGGCGGCA
TCGGCGAGACCTTCACCGTCCGCAAGATCTCCTTCGGGGTCGGCGTCGAGCGCACCTTCCCGCTCCACACCCCGATCATC
GACCACATCGAGGTGCTCACCCGCGGTGACGTCCGCCGCGCGAAGCTCTACTACCTGCGCGGCCTGCGCGGCAAGGCGGC
CAAGATCCGCGAGAAGCGTGACACCGTGCCGGCCAAGTCCGGGGCCAAGGCCTGA

Protein sequence :
MHTFDAIDAASLRSDIPEFRAGDTLKVHVKVVEGTRSRVQVFQGVVIRRHGGGIGETFTVRKISFGVGVERTFPLHTPII
DHIEVLTRGDVRRAKLYYLRGLRGKAAKIREKRDTVPAKSGAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 3e-28 68
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-21 51