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Name : Intca_2159 (Intca_2159) Accession : YP_004099395.1 Strain : Intrasporangium calvum DSM 43043 Genome accession: NC_014830 Putative virulence/resistance : Unknown Product : helicase c2 Function : - COG functional category : K : Transcription COG ID : COG1199 EC number : - Position : 2410841 - 2413123 bp Length : 2283 bp Strand : - Note : COGs: COG1199 Rad3-related DNA helicase; InterPro IPR014001: IPR006555: IPR014013; KEGG: kse:Ksed_17400 DNA helicase, Rad3; SMART: helicase c2; DEAD-like helicase; SPTR: ATP-dependent helicase; PFAM: DEAD/DEAH box helicase DNA sequence : ATGGCCGCCCCACCCTCCCTCGACCAGCTCCTCCACGCCGCCGTCTCCGCGGTGGGGGGCAGCGAGCGGCCAGGGCAGGT GCAGATGGCTCGGGCGGTGGCCGCGGCGATCGCCAACGACGAGCACCTGCTCGTCCAGGCGGGCACCGGCACCGGCAAGT CGCTGGCCTACCTCGTTCCGGCGGTCGCTCACGCCCAGGCGGCTGGCCGCCCTGCCGTCGTGGCGACGGCCACGCTGGCC CTGCAGGCCCAGATCGTCGACCGCGACATGCCTCGTGTCGCCGTCGCCCTCGAGCCCCTCCTCGGCCGACGCCCGACCTA TGCGCTCGTCAAGGGCCGCCGCAACTACGTCTGCCTCAACAAGATCGAAGGTGGCTTCCCGGAGGAGGACGACGGCCTGC TCTCCGTCGGCCAGGTCGATGCCGGTGCGGGACGGCTGGGGCAGGAGGTGGTGCGCCTGCGCGAGTGGGCCGCCGAGACC GACTCGGGCGACCGTGACGAGCTCGTGCCCGGAGTCACGGAGCGGGCGTGGCGCCAGGTCTCCGTGTCGGCGCACGAGTG TCTCGGCAGCAAGTGCCCGCTCGTCGCAGCATGCTTCGTCGAGCGGGCGCGGGAGGCGGCGAAGGACGTCGACGTCATCG TCACCAACCACTCGTTCATGGCGATCGACGCGTTCGAGGGGCGCCAGATGCTCCCGGGGCACGACCTCCTCGTCGTCGAC GAGGCGCACGAGCTCGTCGACCGCGTGACGGCGACGATCACGGACGAGCTGACCGGTGCCATGGTGACGGCGGCGGCGCG AAAGGCGGGTCGTCTCTCGGAGAACACCCAGCCCCTCGACGAGGCGGGGGAGCTCCTGGCGGCGGCCCTCGAGCCACTCC AGGACGGTCGGCTGCTCGGGCTGCCCGAGGCGGTCACGCTGGCGTTGAGCCGGGTCAGGGACACGGCCCGCGCGGTCCAG TCCGACCTCAAGCCGGCCCAGGGCCAGGAGGCGGACGGCGCCCGGCAGGTGGCGCGCGCGGCCGTCGAGGAGGTGCACGA GAACGCCGAGCGCATCCTGGAGGACCGGGGCCTCGACGTCGTCTGGCTCGCCCACGACCAGCGCCGCGGCCCGGTCCTGC GGGTGGCCCCGATGAGCGTCGCGATGCTGGTCCGGGACAAGGTGTTCGCCGACCGCACCGTCGTGCTCACCTCCGCGACC CTCGAGCTGGGCGGGTCCTTCGATGCCGTCGCCGGCACCATCGGCCTCCGCGGCGACGGCGCCCCCGCCTGGCAGGGGCT GGACGTCGGCAGCCCCTTCGACTACCGCCGGCAGGCCATCGCGTACGTGGCCGCCCACCTGCCGCCGCCGGGTCGGGACG GAGCCAGCGACGAGAGCCTCGACGAGATCGAGCAGCTCGTCCGGGCCGCCGGCGGGCGGACCCTCGGTCTCTTCTCCTCG ATGCGGGCTGCGCAGGCGGCGGCCGAGCTGATGCGAGCCCGCCTCGGGGACGACATCCCGGTCCTGTGCCAGGGCGAGGA CCAGATCTCGACGCTGGTCCGCCAGTTCGCCCGCGACCCCCGCACCTGCCTCTTCGGCACCCTGACGCTGTGGCAGGGCG TCGATGTTCCCGGGTCGTCCTGCCAGCTCGTCATCATCGACCGCATCCCCTTCCCGCGGCCGGACGACCCCCTCGCCTCC GCGCGGTCGCAGGCCATCGCCCGGATGGGCGGCAACGGCTTCATGGCCGTCTCGGCGACGCACGCCGCACTCCGGCTCGC ACAGGGGGCCGGTCGGCTGGTTCGACGCGGGGACGACCGGGGCGTGGTGGCCTTCCTCGACTCCCGGATGATGACCGCTC GTTATGCGGGGTTCCTCCAGCGCTCCCTCCCGCCGTTCTGGCCGACGACGGACAAGGCCATGGTGCTCGCCGCCCTGGCC CGTCTGGACGAGACGGCGCCGGACCCGCTTCCCGTTGCTGAACCGGCCCTGCGTTCACTGACCGGCGCCCGGACCGACCG TGACGGCACCGAGCACCCGGGGCCGGCGTCGGCTGCCCCGGCTGCCCCGGTGGCCCCGGCGCGGCCCGTTGCGGCTGACC CCCCGGTGGCTGCCTCGCCCCGGAGCGCGGTGACCGGTGGGCACGCGTGGTCCGACGAGCAGGACGAGGAGCTCCGCGAC GCGGCCGACGCGGGGATGCTGCTCGAGGAGCTGGTCGAGCACTTCGAGCTGCCGGAGGCGACCATCGCGGCTCGGGCCGG CCAGCTCGGTCTCACCCTGTCCTCCGGCCAGCTCTTCGACTGA Protein sequence : MAAPPSLDQLLHAAVSAVGGSERPGQVQMARAVAAAIANDEHLLVQAGTGTGKSLAYLVPAVAHAQAAGRPAVVATATLA LQAQIVDRDMPRVAVALEPLLGRRPTYALVKGRRNYVCLNKIEGGFPEEDDGLLSVGQVDAGAGRLGQEVVRLREWAAET DSGDRDELVPGVTERAWRQVSVSAHECLGSKCPLVAACFVERAREAAKDVDVIVTNHSFMAIDAFEGRQMLPGHDLLVVD EAHELVDRVTATITDELTGAMVTAAARKAGRLSENTQPLDEAGELLAAALEPLQDGRLLGLPEAVTLALSRVRDTARAVQ SDLKPAQGQEADGARQVARAAVEEVHENAERILEDRGLDVVWLAHDQRRGPVLRVAPMSVAMLVRDKVFADRTVVLTSAT LELGGSFDAVAGTIGLRGDGAPAWQGLDVGSPFDYRRQAIAYVAAHLPPPGRDGASDESLDEIEQLVRAAGGRTLGLFSS MRAAQAAAELMRARLGDDIPVLCQGEDQISTLVRQFARDPRTCLFGTLTLWQGVDVPGSSCQLVIIDRIPFPRPDDPLAS ARSQAIARMGGNGFMAVSATHAALRLAQGAGRLVRRGDDRGVVAFLDSRMMTARYAGFLQRSLPPFWPTTDKAMVLAALA RLDETAPDPLPVAEPALRSLTGARTDRDGTEHPGPASAAPAAPVAPARPVAADPPVAASPRSAVTGGHAWSDEQDEELRD AADAGMLLEELVEHFELPEATIAARAGQLGLTLSSGQLFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1474 | YP_001800868.1 | ATP-dependent DNA helicase | Not tested | Not named | Protein | 7e-100 | 48 |
