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Name : Intca_1472 (Intca_1472) Accession : YP_004098714.1 Strain : Intrasporangium calvum DSM 43043 Genome accession: NC_014830 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1643560 - 1645974 bp Length : 2415 bp Strand : - Note : COGs: COG2183 transcriptional accessory protein; InterPro IPR018974: IPR003029: IPR006641; KEGG: amd:AMED_1551 transcriptional accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPT DNA sequence : GTGGCAGTGAGCACGAGTGGCGCGGGGCCGTCGATCGAGCAGCGGATCGCCGAGGAGCTCGGCGTCCGCCGAGGCCAGGT CCAGGCCGCCGTCGGGCTCCTCGACGGAGGCGCGACCGTCCCCTTCGTCGCGCGCTACCGCAAGGAGGTCACCGAGGGCC TCGACGACGCCCAGCTGCGGTCACTCGAGGAGCGCCTCGGCTACCTGCGCGAGCTCGAGGAGCGACGCCGGACGGTGCTC GCCTCCATCGACGAGCAGGGCAAGCTCACCGACGAGCTCCGCACCCAGCTGCTGGCCGCCGAGACGAAGGCACGGCTCGA GGACATCTACCTCCCGTACAAGCCGAAACGGCGCACCCGGGCCCAGACCGCCAAGGAGTCCGGCCTCGAGCCGCTCGCCG ACGGGCTGCTCGGCGACCCGACGGTCTCGCCGCTGGCCGCGGCGGCCGCCTTCGTCGACGCGTCGAAAGGGGTGGCCGAC GCCGCAGCCGCCCTCGACGGGGCCCGGGCCATCCTCGTCGAACGCTTCGCCGAGGACGCCGACCTCGTCGGCGTCCTGCG CGAGCGGATGTGGTCGCGCGGGCACCTCACGGCCAAGGTCCGCGCGGGGAAGGAGGCCGAGGGTGCGAAGTTCTCCGACT ACTTCGACTTCTCCGAGCCGTTCCCGAAGATGCCGTCCCACCGCATCCTCGCCATGCTCAGGGGCGAGAAGGAGGAGGTC CTGAGCCTGACCGTCGACCCCCTCCCGCCTGCGGACGGGCCGGCGACCGGGCCGACGGAGTACGAGCGGGCCATCGCGGC CCGCTTCGGGATCTCGGACCGGGGCCGTCCGGCCGACGCCTGGCTCGGCGACACCGTGCGGTGGGCCTGGCGCACCAAGC TGCTCGTCCACCTCGGGATCGACCTGCGGATGCGGCTGCGCAGGTCGGCCGAGGAGGAGGCGGTCCGCGTCTTCGCCGCG AACCTGCGCGACCTGCTCCTCGCCGCTCCCGCCGGAACCCGCGCCACGATGGGTCTCGACCCCGGCTTCCGCACCGGCGT CAAGGTCGCCGTGGTCGACGCGACGGGCAAGGTCGTCGCCACCGACGTCATCCACCCGCACGTGCCGCAGAACCAGTGGG ACCGGTCGATCGCCACCCTCGCCCGCCTCTGCGGAGACCACCACGTCGACCTCATCGCCATCGGCAACGGCACGGCGTCG CGAGAGACCGACCGCCTGGCCCAGGATCTCGTCAAGCGGCACCCGGACCTCAAGGTCACCCCTGCCGTCGTGTCTGAGGC GGGCGCATCCGTCTACTCCGCCTCCGCCTACGCCTCGGAGGAGCTGCCGGGGCTCGATGTGTCCCTCCGCGGAGCAGTGT CGATCGCGCGGCGGCTCCAGGACCCGCTCGCCGAGCTCGTCAAGATCGAGCCGAGGGCGATCGGTGTCGGGCAGTACCAG CACGACCTCTCACAGACATCCCTGTCCCGGTCCCTCGACGCCGTGGTCGAGGACTGCGTCAACGCCGTGGGCGTCGACGT CAACACCGCCTCGGCTCCGCTCCTTCGACGCGTCTCCGGCATCACCGCCGGGCTTGCGGACGGCATCGTCGCGCACCGGG ACACCAACGGCCCATTCCGGACGAGGTCGGCGCTCAAGGAGGTCCCGCGCCTCGGCGCCAAGGCCTTCGAGCAGGCTGCC GGCTTCCTCCGCATCCCCGACGGTGACGACCCGTTGGACTCCTCGGCGGTCCACCCCGAGGCCTACCCGGTGGTCCGGCG CATCCTCACCGAGACCGGCTTCGAGCTGCGTCAGCTCATCGGCAACACCGCTGTGCTGCACCGACTCCGCCCGGAGGCCT TCGTCGACGACCGGTTCGGCCTCCCCACCGTCACCGACATCCTCTCCGAGCTCGACAAGCCGGGCCGCGACCCACGACCC GCCTTCCGCACCGCCAGCTTCAAGGAGGGCGTCGAGGAGCTGAAGGACCTCAGGCCGGGCATGACGCTCGAGGGCGTCGT CACCAACGTCGCCGCGTTCGGCGCGTTCATCGACGTCGGCGTCCACCAGGACGGCCTCGCCCACGTCTCCGCGCTCTCCC ACCGCTTCGTCTCCGACCCCAGAGAGGTCGTCAAGCCGGGCGACGTCGTCACCTGCAAGGTTCTCGACGTGGACCTCGTC CGGAAGCGGATCTCCCTGAGCCTGCGCCTCGACGACGAGGTGGCTCCGCCTGGCCGGGCGTCGACTGCGACACCGGATGA CGGGGGGGCGCGTCCGGGTGCGGGACGGCGCCCTGGCCGGGATGGTCGCGATGGTCGGGATGGCCGGCGTGGTCGGGCCG GTACACCCTCATCGGGTGCCCGCGGCTCGCGGGAGGACCCGCCACCGACCAGCGCTGTCGCAGACGCCCTCCGGCGCGCC GGCTACCAGGGCTGA Protein sequence : MAVSTSGAGPSIEQRIAEELGVRRGQVQAAVGLLDGGATVPFVARYRKEVTEGLDDAQLRSLEERLGYLRELEERRRTVL ASIDEQGKLTDELRTQLLAAETKARLEDIYLPYKPKRRTRAQTAKESGLEPLADGLLGDPTVSPLAAAAAFVDASKGVAD AAAALDGARAILVERFAEDADLVGVLRERMWSRGHLTAKVRAGKEAEGAKFSDYFDFSEPFPKMPSHRILAMLRGEKEEV LSLTVDPLPPADGPATGPTEYERAIAARFGISDRGRPADAWLGDTVRWAWRTKLLVHLGIDLRMRLRRSAEEEAVRVFAA NLRDLLLAAPAGTRATMGLDPGFRTGVKVAVVDATGKVVATDVIHPHVPQNQWDRSIATLARLCGDHHVDLIAIGNGTAS RETDRLAQDLVKRHPDLKVTPAVVSEAGASVYSASAYASEELPGLDVSLRGAVSIARRLQDPLAELVKIEPRAIGVGQYQ HDLSQTSLSRSLDAVVEDCVNAVGVDVNTASAPLLRRVSGITAGLADGIVAHRDTNGPFRTRSALKEVPRLGAKAFEQAA GFLRIPDGDDPLDSSAVHPEAYPVVRRILTETGFELRQLIGNTAVLHRLRPEAFVDDRFGLPTVTDILSELDKPGRDPRP AFRTASFKEGVEELKDLRPGMTLEGVVTNVAAFGAFIDVGVHQDGLAHVSALSHRFVSDPREVVKPGDVVTCKVLDVDLV RKRISLSLRLDDEVAPPGRASTATPDDGGARPGAGRRPGRDGRDGRDGRRGRAGTPSSGARGSREDPPPTSAVADALRRA GYQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 60 |
