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Name : Intca_1398 (Intca_1398) Accession : YP_004098641.1 Strain : Intrasporangium calvum DSM 43043 Genome accession: NC_014830 Putative virulence/resistance : Unknown Product : hydroxymethylpyrimidine synthase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1561483 - 1563195 bp Length : 1713 bp Strand : - Note : COGs: COG0422 thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: nca:Noca_3400 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: phosphomethylpyrimidine synthase; TIGRFAM: thiamine biosynthesis protein ThiC; PF DNA sequence : ATGACGCACGCCAACCCCGCGCGGAGCAAGGTCTACGTGCCGAGCGAGCCCAGCGGCATACGGGTGCCGTTCACCGAGGT CACCCTCACGGAAGGCAACGAACCCTTCCACCTCTACGACACATCGGGGCCCGGGAGCGTCGCCGAGGAGGGTCTCCCGC CCGCCCGGGCTCGCTGGATCGAGGGCCGCGCCGACGTCGAGACGTACACCGGTCGGGAGCGCGACCTCGCCGACGACGGA CGCTCGGCCGTCCGACGGGGTGAGGCGTCCCTCGAGTGGCGCGGCGAGCGGCGAGCACCGCTGCGCGCCAAGCCCGGCCG GCGGGTCACTCAGATGGCGTACGCGCGCGCCGGCACCGTCACCCGAGAGATGGAGTACGTCGCGGCCCGCGAGCGCTGCG ACGTCGAGCTCGTCCGATCGGAGGTCGCCGCGGGCCGGGCCATCATCCCGAGCAACGTCAACCATCCGGAGAGCGAGCCG ATGGTCATCGGCCGGCGCTTCCTCGTCAAGATCAACGCGAACATCGGCAACTCCGCCGTGACCAGCTCGATCGCCGAGGA GGTCGAGAAGCTCACCTGGGCGACGCGCTGGGGTGCCGACACCGTGATGGACCTGTCCACCGGCGATGACATCCACACCA CCCGCGAGTGGATCGTGCGCAACTCGCCCGTCCCGATCGGCACCGTGCCGATCTACCAGGCGCTCGAGAAGGTGGACGGT GACGCGTCGCAGCTCTCGTGGCCCGTCTTCCGCGACACCGTCATCGAGCAGTGCGAGCAGGGTGTCGACTACATGACCAT CCACGCCGGGGTGCTGCTGCGCTACGTGCCGATGACGGCGCAGCGGATCACCGGCATCGTCAGCCGCGGCGGCTCGATCA TGGCCGGCTGGTGCCTGGCCCACCACGAGGAGAACTTCCTGTACACGCACTTCGACGAGCTCTGCGAGATCTTCGCCCAG TACGACGTCGCGTTCAGCCTCGGTGACGGGCTGCGTCCCGGCTGCACCGCGGACGCGAACGACGAGGCCCAGCTGTCCGA GCTGCGCACCCTCGCCGAGCTGACGAAGCGGGCGTGGGAGTTCGACGTCCAGGTCATGGTCGAGGGTCCGGGCCACGTGC CGCTCAACCTCGTCAAGGAGAACGTCGACCTCCAGCAGGACTGGTGCCACGGAGCTCCGTTCTACACGCTCGGCCCGCTC GTGACCGACGTCGCGCCCGGCTACGACCACATCACCTCGGCGATCGGCGCCGCGCACATCGCGTGGCACGGCACGGCGAT GCTCTGCTACGTCACGCCCAAGGAGCACCTCGGGCTGCCCAACCGGGACGACGTCAAGACCGGCGTCATCACGTACAAGC TGGCCGCGCACGCCGCCGACGTCGCCAAGGGGCACCCGTACGCGCGCGACTGGGACGACGCCCTGTCCAAGGCGAGGTTC GAGTTCCGGTGGGAGGACCAGTTCAACCTGTCGCTCGACCCCGACACGGCCCGTGCCTTCCACGACGAGACCCTGCCCGC CGAGCCGGCCAAGACGGCGCACTTCTGCTCGATGTGCGGCCCGAAGTTCTGCTCCATGCGGATCTCGCAGGACGTTCGGA GGTATGCCGCTGAGCGCGGTCTCACGGACGAGGTGGCCGTGGGTGCCGGGCTGGCGGAGAAGAGCCGCGAGTTCGTGGAG CTCGGCTCGTCGGTGTACGTCGAGACCCCTTGA Protein sequence : MTHANPARSKVYVPSEPSGIRVPFTEVTLTEGNEPFHLYDTSGPGSVAEEGLPPARARWIEGRADVETYTGRERDLADDG RSAVRRGEASLEWRGERRAPLRAKPGRRVTQMAYARAGTVTREMEYVAARERCDVELVRSEVAAGRAIIPSNVNHPESEP MVIGRRFLVKINANIGNSAVTSSIAEEVEKLTWATRWGADTVMDLSTGDDIHTTREWIVRNSPVPIGTVPIYQALEKVDG DASQLSWPVFRDTVIEQCEQGVDYMTIHAGVLLRYVPMTAQRITGIVSRGGSIMAGWCLAHHEENFLYTHFDELCEIFAQ YDVAFSLGDGLRPGCTADANDEAQLSELRTLAELTKRAWEFDVQVMVEGPGHVPLNLVKENVDLQQDWCHGAPFYTLGPL VTDVAPGYDHITSAIGAAHIAWHGTAMLCYVTPKEHLGLPNRDDVKTGVITYKLAAHAADVAKGHPYARDWDDALSKARF EFRWEDQFNLSLDPDTARAFHDETLPAEPAKTAHFCSMCGPKFCSMRISQDVRRYAAERGLTDEVAVGAGLAEKSREFVE LGSSVYVETP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 1e-168 | 60 |
