Gene Information

Name : Intca_1395 (Intca_1395)
Accession : YP_004098638.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1558130 - 1559767 bp
Length : 1638 bp
Strand : +
Note : COGs: COG4147 symporter; InterPro IPR019900: IPR001734; KEGG: bcv:Bcav_3373 SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: S

DNA sequence :
GTGAGCACCCAGCTCGTCTCGCTCGCCACGGCGGAGACCCAGGTCGGCAACCCGGCCCTCAACATCGCCATCTTCGGCGT
CTTCGTCCTCATCACGCTGGCGATCGTCGTCAAGGTCTCGCGCGGGAACCGCAGCGCCGCCGAGTACTACGCCGGCGGGC
GGGCCTTCTCCGGCCGCCAGAACGGCATCGCGATCGCCGGAGACTACCTCTCCGCGGCCTCCTTCCTCGGCATCGCCGGC
GCCATCGCCATCAACGGCTACGACGGCTTCCTCTACTCGATCGGCTTCCTCGTCGCCTGGCTGGTCGCCCTGCTGCTCGT
CGCGGAGCTGCTCCGCAACGTCGGCAAGTACACGATGGCTGACGTCCTCTCGTTCCGGCTGCGGCAGCGACCGGTCCGCA
TCGCCGCGGCCATCTCGACGCTCGCGGTCTCCTTCTTCTACCTGCTCGCCCAGATGGCCGGCGCCGGCGGTCTCGTCGCG
CTCCTGCTCGGGGTCAAGGGCGACTGGGGCCAGCGCCTCGTCATCGTCATCGTCGGCGTGATCATGCTCTTCTACGTCAT
CTACGGAGGCATGAAGGGGACCACCTGGGTCCAGATGATCAAGGCCGTCCTGCTTATCATCGGCGCCGGGATCATGACCC
TCTGGGTGCTCGCCAAGTTCGGCCTCAACCTCTCCTCGGTCCTCGGTGAGGCGTCGAAGACGTCGCTCGAGTCCGGGGGC
AAGGACCTTCTGCTGCCCGGCAACCAGTACAAGAACCCGATCGACTTCATCTCCCTGTCGATGGCGCTCGTGCTCGGCAC
GGCCGGCCTGCCGCACGTGCTGATGCGCTTCTACACGGTGCCGACGTCGCGTGAGGCCCGCCGCTCCGTCGTCTGGGCCA
TCTGGCTCATCGGCCTGTTCTACCTGTTCACCCTGGTCCTCGGCTACGGCGCAGCGGACCTCGTCGGCGGCGCGGAGATC
AAGGCGGCCCCCGGCGGCGTCAACTCGGCGGCCCCGCTGCTCGCCTTCGCCCTCGGCGGTGAGATCCTGCTCGGCATCAT
CTCCGGCGTCGCCTTCGCAACCATCCTCGCGGTGGTCGCGGGGCTGACCATCACGGCGAGCGCCTCGCTGTCCCACGACG
TCTACAACACGATCGTCAAGGACGGCAACGCGACCCCGGAGGAAGAGGTACGGGTCGCTCGCATCGCCGCGCTCGTCCTC
GGGGCCGTGGCGATCGTGGGTGGCATCTTCGCCCTCGGCCAGAACATCGCGTTCCTCGTCGCCCTCGCGTTCGCCATCGC
GGCGAGCGCGAACCTGCCGACGATCCTCTACTCGCTGTTCTGGAAGCGGTTCAACACCAGGGGCGCGCTGTGGTCGATCT
ATGGCGGGCTGGTCAGCGCGATCACGCTCATCGTGTTCTCGCCGGTCGTGTCGGGCAAGCCGAACGACCCCGTGACGGGC
AAGAGCCCGTCGATGCTCCAGGGCATCGACTTCCACTGGTTCCCGCTCGACAACCCGGGCATCGTCTCGATCCCGCTCGG
CTTCATTCTCGGCTACATCGGGACCGTGACGAGCAAGGAGTACAACGCGGCGAAGTACGCCGAGATGGAGGTGCGCTCCC
TCACCGGCCACGGCGCCGAGGTGGCCACCCACCACTGA

Protein sequence :
MSTQLVSLATAETQVGNPALNIAIFGVFVLITLAIVVKVSRGNRSAAEYYAGGRAFSGRQNGIAIAGDYLSAASFLGIAG
AIAINGYDGFLYSIGFLVAWLVALLLVAELLRNVGKYTMADVLSFRLRQRPVRIAAAISTLAVSFFYLLAQMAGAGGLVA
LLLGVKGDWGQRLVIVIVGVIMLFYVIYGGMKGTTWVQMIKAVLLIIGAGIMTLWVLAKFGLNLSSVLGEASKTSLESGG
KDLLLPGNQYKNPIDFISLSMALVLGTAGLPHVLMRFYTVPTSREARRSVVWAIWLIGLFYLFTLVLGYGAADLVGGAEI
KAAPGGVNSAAPLLAFALGGEILLGIISGVAFATILAVVAGLTITASASLSHDVYNTIVKDGNATPEEEVRVARIAALVL
GAVAIVGGIFALGQNIAFLVALAFAIAASANLPTILYSLFWKRFNTRGALWSIYGGLVSAITLIVFSPVVSGKPNDPVTG
KSPSMLQGIDFHWFPLDNPGIVSIPLGFILGYIGTVTSKEYNAAKYAEMEVRSLTGHGAEVATHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 4e-100 59
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 9e-48 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Intca_1395 YP_004098638.1 SSS sodium solute transporter superfamily protein BAC0564 Protein 4e-60 48
Intca_1395 YP_004098638.1 SSS sodium solute transporter superfamily protein BAC0570 Protein 4e-49 47