|
Name : Intca_1326 (Intca_1326) Accession : YP_004098569.1 Strain : Intrasporangium calvum DSM 43043 Genome accession: NC_014830 Putative virulence/resistance : Unknown Product : RNAse PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 1482260 - 1483030 bp Length : 771 bp Strand : + Note : COGs: COG0689 RNase PH; InterPro IPR002381: IPR018336: IPR001247: IPR015847; KEGG: kra:Krad_3763 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: ribonuclease PH; TIGRFAM: ribon DNA sequence : ATGGCTAGCCTCAGGGGCATGACTGCGACACGACATGACGGACGGGCCCCCGACGAGACCCGGGAGGTGCGGATCACCCG TGGGTGGCTCGACCACGCCGAGGGCAGCGTCCTCGTGGAGTTCGGGCGCACCCGGGTGCTCTGTGCGGCCTCCTTCACCG AGGGCGTGCCGCGCTGGCTCAAGGGTCGGGGAACGGGGTGGGTGACGGCCGAGTACGCCATGCTGCCCCGGGCCACGAAC ACCCGCTCGGACCGCGAGAGCGTCAAGGGGCGCATCGGCGGCCGGACCCATGAGATCTCGCGGCTCATCGGCCGCAGCCT GCGCGCCGTGATCGACACCAAGGCGCTCGGCGAGAACACCATCGTCCTCGACTGCGACGTCCTCCAGGCCGACGGCGGCA CCCGGACCGCGGCCATCACCGGCGCCTACGTCGCGCTGGCCGACGCCATCGAGGACGCTCGAGCCAGGGGCCTCATCGCC AAGGGAGCCCAGCCGCTGACCGGCTCGGTCGCCGCGGTCTCCGTGGGCATCGTCGGTGGCCGGGCCGTCATCGACCTCGA CTACCCCGAGGACTCGACCGCGGAGACGGACATGAACGTCGTCATGACGGGCGACGGGCGCTACATCGAGGTGCAGGGCA CCGCCGAGGGCGAGCCCTTCGACCGCGCCCTCCTCGACGACCTGCTGGAGCTCGCGGCCAAGGGGTGCGCCGACCTCACC GCAGCCCAGCGAGCCGCCCTCGCCTCCGGTTCGGAGGGGGTCGCGTCATGA Protein sequence : MASLRGMTATRHDGRAPDETREVRITRGWLDHAEGSVLVEFGRTRVLCAASFTEGVPRWLKGRGTGWVTAEYAMLPRATN TRSDRESVKGRIGGRTHEISRLIGRSLRAVIDTKALGENTIVLDCDVLQADGGTRTAAITGAYVALADAIEDARARGLIA KGAQPLTGSVAAVSVGIVGGRAVIDLDYPEDSTAETDMNVVMTGDGRYIEVQGTAEGEPFDRALLDDLLELAAKGCADLT AAQRAALASGSEGVAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 7e-52 | 62 |
