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Name : Intca_1298 (Intca_1298) Accession : YP_004098543.1 Strain : Intrasporangium calvum DSM 43043 Genome accession: NC_014830 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1450657 - 1451136 bp Length : 480 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR020081; KEGG: kra:Krad_3779 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : GTGCCGAAGGAGAAGGGGCGGTCGCTCGTCGCGAGCAACCGCAAGGCGCGCCACGACTACCACATCGAGGACACCTTCGA GGCCGGCATCGTCCTCTCGGGCACCGAGGTCAAGGCGCTGCGCATGGGGCGGGCCTCGCTCGTCGACGGGTTCGCGATGT TCACCGGTGACGAGCTCTACCTTGAGAACGTCCACATCCCCGAGTACCTCAACGGGACGTGGAACAACCACGCACCACGG CGCAAGCGCAAGCTGCTGCTCCACCGCTCCGAGCTGGAGAAGATCTCGGGCAAGACCCGGGAGAGTGGCCGGACGATCGT CCCGCTGGCGCTGTACTTCAAGGACGGCCGCGCCAAGGTCGAGATCGCCATCGCGACCGGCAAGAAGCAGTACGACAAGC GCCATGCGCTGCGCGAGCGACAGGACCAGCGCGAGACCGCCCGTGCCATGAGCGCGGCGCACCGCGGTCGCCAGGCCTAG Protein sequence : MPKEKGRSLVASNRKARHDYHIEDTFEAGIVLSGTEVKALRMGRASLVDGFAMFTGDELYLENVHIPEYLNGTWNNHAPR RKRKLLLHRSELEKISGKTRESGRTIVPLALYFKDGRAKVEIAIATGKKQYDKRHALRERQDQRETARAMSAAHRGRQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-35 | 56 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-39 | 55 |
