Gene Information

Name : Intca_1274 (Intca_1274)
Accession : YP_004098519.1
Strain : Intrasporangium calvum DSM 43043
Genome accession: NC_014830
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : 2.8.3.5
Position : 1424045 - 1424854 bp
Length : 810 bp
Strand : -
Note : COGs: COG1788 acyl CoA:acetate/3-ketoacid CoA transferase subunit alpha; InterPro IPR012792: IPR004163: IPR004165; KEGG: nca:Noca_0330 3-oxoacid CoA-transferase, subunit alpha; PFAM: coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SPTR: 3-oxoadi

DNA sequence :
ATGGACAAAGTCGTCTCCACACCTCAGGAGGCCATCGCCGGCATCAGTGACGGGATGTCACTGGCGGTCGGCGGTTTCGG
TCTCTGTGGCATCCCCAGTGTGCTCATCGCCGCCATTCACGATGCCGGCATCCAGGACCTCGAAGCGATCAGCAACAACT
GCGGCGTCGACGACTGGGGGCTGGGGATCCTGCTCAAGGACAAGCGGATCCGCCGGATGGTCGCCTCTTACGTCGGTGAG
AACAAGGAGTTCGAGCGGCAGTACCTGCACGGCGAGCTCGAGGTCGAGCTGACCCCCCAGGGCACCCTCGCCGAGCGGCT
GCGCGCCGGTGGGGTCGGCATCCCGGCCTTCTTCACGATCACCGGTGCCGGCACCCAGGTCGCCGAGGGCGGCCTGCCGT
GGAAGTACGACGCCGACGGCAACGTCGTGCTCGCCTCGCCGCCGAAGCAGACCCAGGACTTCGAGGTCGACGGCGAGACG
AAGACGTTCGTGCTCGAGGAGGCGATCCGCGCCGACTACGCGCTGATCCGCGCCGCCAAGGGTGACCGGCACGGCAACCT
CGTCTTCAACCAGTCCGCCCGCAACTTCAACCCGCTCTGCGCGATGTCCGGCAAGGTCGCGATCGCCGAGGTCGAGCAGC
TCGTCGAGCCCGGCGAGCTGCACCCGGACGAGGTGCACCTGCCGGGGATCTTCGTCCACCGGGTGCTGCCGCTGAGCCCG
GAGCAGGCCGCCGAGAAGCGGATCGAGCGCCGGACCGTCCGCCCCCGCCCCGACGCTGCGGGAACCCAGACCGAGAAGCA
GGAGGCCTGA

Protein sequence :
MDKVVSTPQEAIAGISDGMSLAVGGFGLCGIPSVLIAAIHDAGIQDLEAISNNCGVDDWGLGILLKDKRIRRMVASYVGE
NKEFERQYLHGELEVELTPQGTLAERLRAGGVGIPAFFTITGAGTQVAEGGLPWKYDADGNVVLASPPKQTQDFEVDGET
KTFVLEEAIRADYALIRAAKGDRHGNLVFNQSARNFNPLCAMSGKVAIAEVEQLVEPGELHPDEVHLPGIFVHRVLPLSP
EQAAEKRIERRTVRPRPDAAGTQTEKQEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 5e-30 41