Gene Information

Name : Ethha_0970 (Ethha_0970)
Accession : YP_004091254.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Unknown
Product : IS66 Orf2 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1065785 - 1066135 bp
Length : 351 bp
Strand : +
Note : PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein

DNA sequence :
ATGCAGTTCGGAGAAAAACCTGTGTATCTTTGCTGTGGGTGCACGGATATGAGGAAATCGATCAACGGGCTAATGACGCT
TGTGCAGCACAGTTTTTCTCTCGACCCTTTTGTCGACGCGCTGTTCGTGTTCTGCAACCGAAGCCGTGACCGCCTGAAAA
TACTGGAGTGGGACGGCGATGGCTTTTGGCTGTATTTCAAACGGCTGGAACGCGGACATTTCCGCTGGCCGTCGTCAGAC
GAGGAAACCACAATGACGCTGAACAGTGAGGAACTGTCTTGTCTGATCGATGGCGCAAGGCTGGAGAAAAAGCTTCGCCG
CAGCGAAGTTCTTGAACACAATATTTCGTAA

Protein sequence :
MQFGEKPVYLCCGCTDMRKSINGLMTLVQHSFSLDPFVDALFVFCNRSRDRLKILEWDGDGFWLYFKRLERGHFRWPSSD
EETTMTLNSEELSCLIDGARLEKKLRRSEVLEHNIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 4e-13 44
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 5e-11 43
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 5e-11 43
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 3e-10 42
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 3e-10 42
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 5e-12 42
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-12 42
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 6e-11 42
unnamed AAL08461.1 unknown Not tested SRL Protein 8e-10 41
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 2e-11 41
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 4e-09 41
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 4e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_0970 YP_004091254.1 IS66 Orf2 family protein VFG1737 Protein 2e-11 42
Ethha_0970 YP_004091254.1 IS66 Orf2 family protein VFG1052 Protein 3e-10 41
Ethha_0970 YP_004091254.1 IS66 Orf2 family protein VFG1665 Protein 7e-12 41