Gene Information

Name : Ethha_0791 (Ethha_0791)
Accession : YP_004091091.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 865408 - 867090 bp
Length : 1683 bp
Strand : +
Note : KEGG: amt:Amet_3482 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase

DNA sequence :
ATGGCGATGAAAAATCTGCGCATAGGTGAAATGCTGCTGGAAGAAAACCTGATCACACAGGCACAGCTCGATGCCGCACT
TGCACGCAAAAAAGAAGGGGACCACAACAAGCTGGGCGACATTCTGGTGGAAATGGGCAGTGTTTCGGAAAAGGAACTGA
CCCGAATGCTGGGCACGCGGCTGAAAGTGCCGGTCGTAGACTTGGTGGAGACGGGCATCGACCAGCATGTTCCAGACCTG
ATACCCGAGGAACTGGCTAAAAAATACATGGTCATTCCCATCGCGCAGGACGGACAGATTCTCACGGTCGCCACCAGCGA
CCCGATGAATTTCTATGCCATCGATGACCTGCGGCTGGCCACTAATCTGGAAATCAAGCCGGTATTGGCCACATCCACAG
ACATCAAAAACGCCATCAGCCATTATTACAGCCGCAAGCTGGCGGAAGAAGCGGCCGAGGACGTCAACCGTGAATTCAAC
TTCAACAGTATGGTTGATGCGGGCAATCTTTTGGGGGAGAAAGTTGATAATGCGCCGGTCGTCCGTCTGGTGGCCTCCAT
CATCCAGCAGGGTATCAAGTTTGGAGCCAGCGATCTCCATATCGAGCCGTCGGAGACGGAAACCCGCATCCGCATGCGCG
TGGACGGTGTGCTCAAGCCGCTGATGTCGCTGGCGGCCGCGGCGCATGCCTCGGTGGTGACCCGCATCAAGATCATGGGC
AATATGAACATTGCCGAGCGGCGCGTGCCGCAGGACGGCAGGGTGGAGATCGTCATCGACGGCCGGCCGGTGGACATGCG
CCTCTCCGTGCTGCCCACCGTGACGGGTGAAAAAGTCGTCATTCGTATTCTGGGCGGACAGGACGCGGTGCGCTCGGTCA
ATGATCTGGGTCTGTCGGCGGAAAACCGCGCGCTGTTTGAAAAAATCACCCGCAGCCCCAATGGTATTCTGCTCGTTTCC
GGCCCCACCGGCAGCGGCAAATCCACCACCCTTTACTCCATCCTCAACCAGCTCAACCAGCCCGGCGTCAACATCATTAC
GGTCGAGGACCCGGTCGAGTACCGCATGCCCGGTGCCAACCAGGTGCAGGTCAACCCCAAAGCGGGCCTGACGTTTGCAA
GCGGCCTGCGCTCCATCCTGCGGCAGGACCCCGATATCATCATGATCGGCGAGATCCGCGACGCCGAGACGGCGCAGATC
GCCATCCGGGCGGCCATTACCGGCCATCTGGTGCTCTCCACCATCCACACCAACGACGCGGCCTCGACCGTTACCCGTCT
GGTGGATATGGGCGTGGAGCCGTTTCTTGTGTCGTCCGCCGTCATCGGCATCATTGCGCAGCGGTTGGTGCGCAAGATCT
GCCCACGCTGCAAGCAGCCGTATACTCCAAGCGACAGTGAGTGCCGGCTGCTGGGCATCCCCGTGCAGAGCACGCTTTAC
CGGGGGACGGGCTGCAATTACTGCGACCACACCGGCTATAAGGGCCGCACCGCCATCCATGAGATTATGGCAATCAGCCA
TGACGTGCGTGAACTCATCGACAATGAAGCCGCCACCGACGAGATCCGCGCGCAGATCGTCCGCGACGGCACCATCACGT
TGCAGGAGTGCTGCAAGCAGCTGGTCTTAAACGGTGTGACCACCAGGGAAGAACTGCTGCGCGCCACCTACAGTATTGGG
TGA

Protein sequence :
MAMKNLRIGEMLLEENLITQAQLDAALARKKEGDHNKLGDILVEMGSVSEKELTRMLGTRLKVPVVDLVETGIDQHVPDL
IPEELAKKYMVIPIAQDGQILTVATSDPMNFYAIDDLRLATNLEIKPVLATSTDIKNAISHYYSRKLAEEAAEDVNREFN
FNSMVDAGNLLGEKVDNAPVVRLVASIIQQGIKFGASDLHIEPSETETRIRMRVDGVLKPLMSLAAAAHASVVTRIKIMG
NMNIAERRVPQDGRVEIVIDGRPVDMRLSVLPTVTGEKVVIRILGGQDAVRSVNDLGLSAENRALFEKITRSPNGILLVS
GPTGSGKSTTLYSILNQLNQPGVNIITVEDPVEYRMPGANQVQVNPKAGLTFASGLRSILRQDPDIIMIGEIRDAETAQI
AIRAAITGHLVLSTIHTNDAASTVTRLVDMGVEPFLVSSAVIGIIAQRLVRKICPRCKQPYTPSDSECRLLGIPVQSTLY
RGTGCNYCDHTGYKGRTAIHEIMAISHDVRELIDNEAATDEIRAQIVRDGTITLQECCKQLVLNGVTTREELLRATYSIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 7e-93 41
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-93 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_0791 YP_004091091.1 type II secretion system protein E VFG0182 Protein 2e-98 49
Ethha_0791 YP_004091091.1 type II secretion system protein E VFG1876 Protein 3e-89 43
Ethha_0791 YP_004091091.1 type II secretion system protein E VFG2048 Protein 1e-94 42