|
Name : Ethha_0748 (Ethha_0748) Accession : YP_004091048.1 Strain : Ethanoligenens harbinense YUAN-3 Genome accession: NC_014828 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 812951 - 814621 bp Length : 1671 bp Strand : + Note : KEGG: lbr:LVIS_2180 trehalose-6-phosphate hydrolase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGGAAAAAGCATGGTGGAAAGAAGCCGTTGTCTATCAAATTTATCCGCGCAGCTTTCAGGATTCCAACGGAGATGGTAT CGGTGATCTGCCGGGCATCACCAGCCATTTGGGTTATATCCGGGAACTGGGTGCGGATGTGGTGTGGCTTTGCCCCATCT ACCAGTCCCCAAACGACGACAACGGGTATGACATCAGCGATTACCGTTCCATTATGAGTGAATTTGGCACCATGGCCGAT TTTGACGAGCTGTTGAAAGCAGCGCACAACCTCGGTTTGAAGATCGTGATGGATCTGGTGGTCAACCATACTTCGGATGA GCATGCCTGGTTTGCGGAAAGCCGCAAGTCCAAAGACAACACCTACAGTGATTATTACATCTGGCGAGACGGAAAAGATG GCAAAGAGCCCAACAACTGGGGCAGCTATTTTTCCGGTTCCGCCTGGCAGTATGACGAGGGACGCGGACAGTATTACCTG CACTTTTTTTCCCCAAAGCAACCGGATCTCAACTGGGATAATCCGGCGGTGCGCGGCTCCGTTTTTGATATGATGACGTG GTGGCTCCAAAAGGGAATCGACGGATTCCGCATGGATGTCATCAGCATGATCTCCAAGCAGCCGGGCCTGCTGGACGGCG AGGTCGCGCCGGGCGCTTTGTATGGGGACGGCAACGTCTTCACCAACAACGGTCCGCATGTGCACGAATACCTGCGCGAA ATGAACCGGAAGGTTCTCTCGCAGTTTGATATCATGACCGTCGGGGAGACCCCGGGCGTGACGGTGGAGGAAGCCAAAAA ATACGCCGGGCTGCACACCGGAGAACTGAATATGGTGTTCCAGTTCGAACATGTGGATCATCAAGGCCCGTACGGCAAAT GGAACGATGATCCGCTGGACCTGCCCAAGCTCAAGGATATCCTGTTCCGGTGGCAGACCGGGTTGGACGGCGTGGCCTGG AACAGCCTGTTTTGGGATAACCATGACCAACCCCGCGCGGTTTCCCGTTTCGGCAACGACAGCAAAGAGTGGCGGGAACG CTCGGCCAAAATGATCGCAACCGCTCTCCACATGCTGCAGGGCACGCCGTATGTTTATCAGGGAGAGGAACTGGGCATGA CCAACGTGCCGTTCCGGACGCTGGAGGAATACCGCGATATCGAAACACGGAATGCCTACGACGAGTTGGTGCATAAGCGT GGGCTGTCCCACGAGCAGATGATGCGTTTTCTGCACCGCATCAGCCGCGATAACGCCCGCACTCCCATGCAGTGGGACGA CGGTGCGAATGCCGGTTTCACCTCCGGAACGCCGTGGATCGGCGTCAACCCGAATTACACCGAGATCAACGCCAAGGCGC AGGTGGGCGACCCGGATTCCGTCTTTTCGTATTATCAGGAACTGATTGCGCTGCGGCACAGCCATGAGATCATTGTCTAT GGCTCGGTTGAGCCGTGGCTGGAACAGGATGAACATATTTTTGCCTATCGGCGCATCCTGCGTGATGAAACTCTGCTGGT TCTTTGCAACTTTTCCGACCAGATGCTCACCGTGCCGCTGCCGGATGGCTGTGCCGACACGCCCGCGCAGCTTATCGGCA ACTATGACGACGCGGCTCCGACCGCCGCGTTGCGCCCGTATGAAGCAAGAGTCTACTTATACAAACAATGA Protein sequence : MEKAWWKEAVVYQIYPRSFQDSNGDGIGDLPGITSHLGYIRELGADVVWLCPIYQSPNDDNGYDISDYRSIMSEFGTMAD FDELLKAAHNLGLKIVMDLVVNHTSDEHAWFAESRKSKDNTYSDYYIWRDGKDGKEPNNWGSYFSGSAWQYDEGRGQYYL HFFSPKQPDLNWDNPAVRGSVFDMMTWWLQKGIDGFRMDVISMISKQPGLLDGEVAPGALYGDGNVFTNNGPHVHEYLRE MNRKVLSQFDIMTVGETPGVTVEEAKKYAGLHTGELNMVFQFEHVDHQGPYGKWNDDPLDLPKLKDILFRWQTGLDGVAW NSLFWDNHDQPRAVSRFGNDSKEWRERSAKMIATALHMLQGTPYVYQGEELGMTNVPFRTLEEYRDIETRNAYDELVHKR GLSHEQMMRFLHRISRDNARTPMQWDDGANAGFTSGTPWIGVNPNYTEINAKAQVGDPDSVFSYYQELIALRHSHEIIVY GSVEPWLEQDEHIFAYRRILRDETLLVLCNFSDQMLTVPLPDGCADTPAQLIGNYDDAAPTAALRPYEARVYLYKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-160 | 58 |
