Gene Information

Name : Ethha_0653 (Ethha_0653)
Accession : YP_004090954.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 701967 - 703220 bp
Length : 1254 bp
Strand : -
Note : KEGG: pdi:BDI_3238 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence :
ATGCACCAAACCTATCCAAAACGGAAGATCGCGGTCGCGGGCACAGGTTATGTCGGCCTGTCCAACGCCATCATCCTGTC
GCAGCACCATACCGTCTTTGCCGTGGACATCCTCCCGGAAAAAGTGGAACAGATCAACAGCCGAAAATCCCCTATTATTG
ATCCGGAAATTGAGGACTATCTCGCAAACCGCCCGCTGGACCTCACCGCGACCACCGACTGGGAAGCCGCTTACCGCGAG
GCCGATTTTGTCGTGATCTGCACGCCGACCAATTACGACCCCGTGAAAAACTATTTTGATACCAGCTCCGTGGAAAGTGT
CATCGCGCAGGTCCGGCAGGTGAATCCCAATGCGGTTCTGGTCATCAAGTCCACCGTGCCTGTGGGCTACACCAAAAGCC
TGCGCGAAAAGCAGGGGTATGGCAATCTCATCTTCAGCCCGGAATTTCTGCGGGAGGGCCGCGCGCTTTACGACAACCTT
TATCCCAGCCGCATCGTCATCGGCAGGCCCGAACATGACGAAAAACTGGCAAACGCGTCGGAACAGTTTGCACAGCTGCT
TGCGGAAGGCGCCGTGAAAAAGGACATTCCGGTGCTGTTCACGGGCTCGACCGAAGCGGAAGCGATCAAGCTTTTTGCCA
ATACATATCTGGCGCTCCGCGTCTCGTTCTTCAATGAACTGGACACCTACGCGGAAATACACGGGCTGCGCACCAGGCAG
ATCATCGAGGGAATCGGCCTGGACCCGCGCATTGGAAGCCATTATAACAACCCGTCTTTCGGATACGGCGGATATTGCCT
GCCGAAAGACACCAAGCAATTACTGGCAAACTACCGGGACGTGCCCGAAAACATCATCCAGGCCATTGTGGAAGCCAACC
GTACGCGGAAAGACTTCATCGCGGAGCGCATCCTGGAAAAAGCCGGATACTACAGCGGCGCCGCCGGGCGGAACGGAACG
CCGGGCAGGCAGGTCATCGTGGGCATCTACCGCCTGACCATGAAGGCAAACAGCGACAATTTCCGCCAGAGCAGCATTCA
GGGCGTTATGAAGCGGCTGAAAGCCAAAGGCGTGGAGGTCGTCATCTACGAACCGACGCTGCATGCAGGGGAACTGTTTT
TCGGCAGCAAAGTGGTGAACGATCTCACGGCGTTCAAAACCATGTCCGATGTTATTGTGGCCAACCGCTACGACGCAGCG
CTCGACGACGTGGAGGAAAAGGTCTACACACGCGACCTGTACCGGCGCGACTGA

Protein sequence :
MHQTYPKRKIAVAGTGYVGLSNAIILSQHHTVFAVDILPEKVEQINSRKSPIIDPEIEDYLANRPLDLTATTDWEAAYRE
ADFVVICTPTNYDPVKNYFDTSSVESVIAQVRQVNPNAVLVIKSTVPVGYTKSLREKQGYGNLIFSPEFLREGRALYDNL
YPSRIVIGRPEHDEKLANASEQFAQLLAEGAVKKDIPVLFTGSTEAEAIKLFANTYLALRVSFFNELDTYAEIHGLRTRQ
IIEGIGLDPRIGSHYNNPSFGYGGYCLPKDTKQLLANYRDVPENIIQAIVEANRTRKDFIAERILEKAGYYSGAAGRNGT
PGRQVIVGIYRLTMKANSDNFRQSSIQGVMKRLKAKGVEVVIYEPTLHAGELFFGSKVVNDLTAFKTMSDVIVANRYDAA
LDDVEEKVYTRDLYRRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-86 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_0653 YP_004090954.1 nucleotide sugar dehydrogenase VFG0963 Protein 7e-102 55