Gene Information

Name : Ethha_0057 (Ethha_0057)
Accession : YP_004090379.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 66368 - 67054 bp
Length : 687 bp
Strand : -
Note : KEGG: tit:Thit_0218 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
TTGATCGAACTGAAAAACGTCAAAAAAGTCTATAAGATGGGAGACAACGAGGTGGCCGCGCTGGGCGGCGTGTCGATCTC
CATTGCCGACGGAGAGTTTACCGCCATCATTGGCCCCTCCGGCAGCGGTAAATCCACGCTGATGAATATCCTCGGCTGCC
TGGACACCCCCGACGAGGGCGACTATTTCCTCGACGGCACGGACATGACCAAGGTGAGCGAAAAGAACCTCAGCCGCATC
CGCAGCCGCAAGATCGGATTCATCTTCCAGCAGTTCAACCTGCTGCAAAAACTCACCGCGCTGGAGAATGTGGAGCTGCC
GATGATCTATCAGGGCGTGCCCGCCAAGGAACGGCGACGGCGGGCGATGGAATCGCTTGAACGCGTAGGACTGGGCGAAC
GCATCCACCACAAACCCAAGGAGCTTAGCGGCGGGCAGCAGCAGCGTGTGGCCATCGCCCGCGCGTTTGCGGCAAAACCC
TCCATCATTTTGGCCGACGAGCCGACCGGCAACCTCGACTCCAAATCCGGCGCGGAAGTGATGACCATCCTGCACCAACT
GCATGAGAGCGGCAACACCATCGTGCTCATCACGCACGATTCCAAGGTGGCCGCGGAGGCCACGCGCCGCGTGCGCATCG
CCGACGGGCTGATTACTTCGGACGACCGAAACGGAGGTGCCGCATGA

Protein sequence :
MIELKNVKKVYKMGDNEVAALGGVSISIADGEFTAIIGPSGSGKSTLMNILGCLDTPDEGDYFLDGTDMTKVSEKNLSRI
RSRKIGFIFQQFNLLQKLTALENVELPMIYQGVPAKERRRRAMESLERVGLGERIHHKPKELSGGQQQRVAIARAFAAKP
SIILADEPTGNLDSKSGAEVMTILHQLHESGNTIVLITHDSKVAAEATRRVRIADGLITSDDRNGGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_0057 YP_004090379.1 ABC transporter NC_012469.1.7686878. Protein 8e-63 55
Ethha_0057 YP_004090379.1 ABC transporter NC_008702.1.4606598. Protein 5e-48 48
Ethha_0057 YP_004090379.1 ABC transporter CP001581.1.gene798.p Protein 8e-43 46
Ethha_0057 YP_004090379.1 ABC transporter CP001581.1.gene598.p Protein 3e-40 44
Ethha_0057 YP_004090379.1 ABC transporter NC_012469.1.7685735. Protein 5e-35 41