Gene Information

Name : Ethha_0306 (Ethha_0306)
Accession : YP_004090623.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Resistance
Product : serine-type D-Ala-D-Ala carboxypeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1876
EC number : 3.4.16.4
Position : 337048 - 337845 bp
Length : 798 bp
Strand : +
Note : KEGG: bwe:BcerKBAB4_3005 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin

DNA sequence : 
ATGGCAAAACGAACCCTTCGTCCCGGGTGCTGCGGTTTTCTGGCGGCGATTGCGGTCTGTGTGGTCGGCGGGCTGGTGTT
TGCCTATGCCATCTTCAACAAGCACAACGCCACAACGTCGTCCGGTACGAGCACGGGCGTGTCTTCCCAGTCCGTTTCCG
CCTCCGTTTCCAAGGCGCTGGCACCGGCCTCGGAGATGAAAACGGGCGGCCTGCTCATGCTCATCAACGCGAAAAACCCC
CTGCCCTCGGATTATACGCCCACGCTTGCCCTGGTGGACAAGTCCTACTACACATCCAGCGACAAGGACAACCATTTCGA
TTCACGCGCGGCGCCCCACCTTTCCCAGATGATCCACGACGCCAGAGCCGACGGCGTGCAGTTGGTGATCTATTCCGGCT
ACCGCAGCATGGCGTACCAGACGGATAATTTCGACCGCAAGGTCTCGGAGTACCGCGCGCAGGGCTACGGGCCAAGCACC
GCATCTTCCAAGGCCGCCACGCTGGTGGCGCCGCCCGGCACCAGCGAGCACGAGAGTGGCCTGGCCGCCGATATCGTTTC
CTCCGACTGGCTTCGGAAAAACGGCGATCTGAACGAGACGTTTGAAAAAACGACGGCCTTTGCATGGCTGGAACAGCATG
CCGCAGATTATGGGTTCATCCTGCGCTACCCCAAGGATAAGACCGACATCACCGGCATTTCGTATGAGCCGTGGCACTGG
CGGTATGTGGGGAAGGACAATGCGGAAAAGATAAACAGCGCGGGTCTTTGCCTGGAAGAATACGACGGGAAAGCGTGA

Protein sequence : 
MAKRTLRPGCCGFLAAIAVCVVGGLVFAYAIFNKHNATTSSGTSTGVSSQSVSASVSKALAPASEMKTGGLLMLINAKNP
LPSDYTPTLALVDKSYYTSSDKDNHFDSRAAPHLSQMIHDARADGVQLVIYSGYRSMAYQTDNFDRKVSEYRAQGYGPST
ASSKAATLVAPPGTSEHESGLAADIVSSDWLRKNGDLNETFEKTTAFAWLEQHAADYGFILRYPKDKTDITGISYEPWHW
RYVGKDNAEKINSAGLCLEEYDGKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanYB NP_815954.1 D-alanyl-D-alanine carboxypeptidase Not tested Not named Protein 8e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_0306 YP_004090623.1 serine-type D-Ala-D-Ala carboxypeptidase AE016830.1.gene2253. Protein 4e-31 43
Ethha_0306 YP_004090623.1 serine-type D-Ala-D-Ala carboxypeptidase U35369.1.gene3.p01 Protein 4e-31 43