Gene Information

Name : Ethha_0209 (Ethha_0209)
Accession : YP_004090527.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 221801 - 224278 bp
Length : 2478 bp
Strand : -
Note : KEGG: cth:Cthe_1789 ATPase AAA-2; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTTGATAAATTCACGGAAAAGGCGGCCGCCGCTCTCAACCTCGCGCTGGAAAGCGCGCGCGATCTGGGCCACACGTA
TGTGGGCACCGAGCATATCCTCATCGGTCTGCTGCGCGAGGGCAGCGGCGTGGCCGCCAAAGTGCTGGAGCAGCACGGCG
TGCAGGCGGACGCGGTGGAAAAACTGGTGGCCGAATCGGTGGGCAGAGGCGCGCATCCCTCCCATGTGACGGCGCAGAGT
CTGACGCCGCGCGGCAAACACATCATCGAGCTGGCATATATGGAAGCGCAGAACCTGGGCCACGGCTACGTCGGCACCGA
GCACCTGCTGATGGCACTGCTGCGCGAGGCGGACAGCGTGGCCGTGGCCGTGATGGTGCGTCTGGGCTGCGAGCCGAAGG
AGTTGTACGCGGAAATCATCCGCGCCATCGGCGGCAATACCAATCAGCCGAACGACAAAGGAGCTTCCCCCGCGCCGGGC
GGCGCGCAGCCGGCCCGCCGCCCGGGCAGCAATACGCCCACGCTCGACCAGTTCGGGCGCGACCTCACCGAGCAGGCCAA
GGCCGCGCGGCTCGACCCGGTGATCGGGCGCGCCAAAGAAATCGAGCGCGTCATCCAGATCCTCTCCCGCCGTACCAAAA
ACAACCCCTGCCTCATCGGTGAACCCGGCGTGGGCAAGACGGCCATCGCCGAGGGGCTGGCCGAGAAGATCGTGGAGGGC
CGCCTGCCCGAGACACTCAAGGACAAGCGTGTGGTCTCCCTTGACCTCACCGGCATGATCGCCGGCACCAAATACCGCGG
TGAATTTGAGGAACGCATCAAAAAAGCGCTGGAAGAAGTGCGCAAGGCGGGCAATGTCATCCTCTTCATCGACGAGCTGC
ACACCATCATCGGCGCGGGCGCAGCCGAAGGTGCCATCGACGCCGCCAATATCCTCAAACCCATGCTGGCGCGCGGCGAA
ATCCAGGTGATCGGCGCCACCACCCTCAACGAATACCGCAAGCATATTGAGAAGGACGCCGCGCTCGAACGCCGCTTCCA
ACCGGTAACGGTGGGCGAGCCCTCGCAGGAGGAAGCGCTCCTGATCCTCAAGGGCCTGCGCGACAAATACGAGGCACACC
ACAAGGTGCGCATCACCGACGGGGCACTCGGGGCGGCGGTCACCCTCTCGGCCCGCTATATCTCCGACCGTTTCCTGCCG
GATAAGGCCATTGACCTGATGGACGAAGCGGCCAGCCGCGTGCGGCTGAACGCCTTCACCGCGCCGCCCGACCTGCGCGA
CCTCGAAGAAAAACTGAAAAAGCTGGCCGAGGAAAAAGAAGCGGCCGTTAAAGCGCAGGATTTTGAGCGCGCCGCCAAGC
TGCGTGACGAGGAAAAACACGTCAACGAGCAAATGGAAAACACAAAAAAAGAGTGGATGGCCGACAACGCCCGCTCCGTC
AAGGAAGTCACCGAGGAGGACATCGCCGATATCGTGGCGGGCTGGACCGGCGTGCCGGTGAAAAAGCTGGCCGAGGAGGA
AAGCGAACGCCTGCTGCACATGGAGGACGTGCTGCACAAACGCGTGGTGGGGCAAAACGAGGCGGTCGCCGCCGTGGCCA
AAGCTATCCGCCGCGGGCGCGTGGGCCTGAAAGACCCCAAACGCCCGGTGGGCTCGTTCATCTTCCTCGGGCCGACCGGC
GTGGGCAAAACGGAGCTTTCCAAAGCGCTGGCCGAGGCGCTGTTCGGGGACGAGAACGCGATGATCCGCGTGGATATGTC
CGAATATATGGAGAAGCACACCGTGTCGCGGATGGTCGGCTCGCCTCCCGGCTATGTGGGATATGACGAGGGTGGCCAGC
TCACCGAAAAGGTGCGCCGCAAACCTTATTCGGTGCTGCTGTTCGACGAGATCGAGAAGGCACATCCGGATGTGTTCAAT
ATTCTGCTCCAAATCCTGGAAGACGGTATTCTCACCGACGCGCAGGGCCGCAAAGTGGATTTTAAAAACACCGTCATCAT
CATGACCTCCAACGTCGGTGCGCGCATGATCACCGACAACCGCCGTCTGGGCTTCGCCAACGCGGACAATGCCATCGCCA
GCGACAAAGAGATCAAGAGCGACGTGATGGGCGAGCTGCGCCGCACGTTCCGCCCCGAGTTTCTCAACCGCGTGGATGAC
ATCATCGTTTTCCACCAGCTCACCAGCGCCGATATCCAGCAGATCGCCGGCCGCATGCTCGAAACCGTCGCCAAACGCAT
CCAGGCGATGGAGATCGGCATCACCTTCTCCGACGAGGTGGTTACCCACATCGCAAAAGAGGGGTTCGACCCGGTCTACG
GAGCACGTCCTCTGCGCCGAGCCATCCAGTCGAAAGTCGAGGACAAATTCTCCGAGGAAATGCTGGAGGGCAAGATCAAG
ACCGGCGATACGGTGCACACCGTGCTGAAAGACGACACCATCGTTTTCGAAACCGCCGCGGCGCCGCAACAGGTCTGA

Protein sequence :
MFDKFTEKAAAALNLALESARDLGHTYVGTEHILIGLLREGSGVAAKVLEQHGVQADAVEKLVAESVGRGAHPSHVTAQS
LTPRGKHIIELAYMEAQNLGHGYVGTEHLLMALLREADSVAVAVMVRLGCEPKELYAEIIRAIGGNTNQPNDKGASPAPG
GAQPARRPGSNTPTLDQFGRDLTEQAKAARLDPVIGRAKEIERVIQILSRRTKNNPCLIGEPGVGKTAIAEGLAEKIVEG
RLPETLKDKRVVSLDLTGMIAGTKYRGEFEERIKKALEEVRKAGNVILFIDELHTIIGAGAAEGAIDAANILKPMLARGE
IQVIGATTLNEYRKHIEKDAALERRFQPVTVGEPSQEEALLILKGLRDKYEAHHKVRITDGALGAAVTLSARYISDRFLP
DKAIDLMDEAASRVRLNAFTAPPDLRDLEEKLKKLAEEKEAAVKAQDFERAAKLRDEEKHVNEQMENTKKEWMADNARSV
KEVTEEDIADIVAGWTGVPVKKLAEEESERLLHMEDVLHKRVVGQNEAVAAVAKAIRRGRVGLKDPKRPVGSFIFLGPTG
VGKTELSKALAEALFGDENAMIRVDMSEYMEKHTVSRMVGSPPGYVGYDEGGQLTEKVRRKPYSVLLFDEIEKAHPDVFN
ILLQILEDGILTDAQGRKVDFKNTVIIMTSNVGARMITDNRRLGFANADNAIASDKEIKSDVMGELRRTFRPEFLNRVDD
IIVFHQLTSADIQQIAGRMLETVAKRIQAMEIGITFSDEVVTHIAKEGFDPVYGARPLRRAIQSKVEDKFSEEMLEGKIK
TGDTVHTVLKDDTIVFETAAAPQQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_0209 YP_004090527.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 57
Ethha_0209 YP_004090527.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 1e-150 52