Gene Information

Name : Ethha_1873 (Ethha_1873)
Accession : YP_004092126.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2007152 - 2007838 bp
Length : 687 bp
Strand : +
Note : KEGG: cbi:CLJ_B0832 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
TTGCAGATGCGTATTGTCATGACAAAGGATTTGTGCAAGGTGTACGGCAAGGGGGAGACCGCCGTACAGGCACTGAAAAG
CGTGAATATCGAGGTGGAACAGGGTGAATTTGTCGCCATCGCGGGCGCTTCCGGCAGCGGCAAGTCTACTTTGCTGCACA
TGTTGGGCGCAGTGGATCTGCCCACCTCCGGCAAAGTGTTGATTGAAAACCGAGACATCTACAAAGAAAGCGAAAAAGGG
CTTTCCGTCTTCCGAAGGCGAAAGATCGGCTTTGTTTTTCAGTTTTACAACCTCATCCCGGTGTTGACAGCGGAAGAAAA
CATCAAGGTGCCGCTTTCGCTGGATGGCAAAGAGCCGGACCCGGCATTTTTGAACGAACTGATCGACACGCTGGGGCTGA
CCGAGCGGCGAAATCATCTGCCCAACCAGCTTTCGGGCGGGCAGCAGCAGCGCGTCGCCATCGGGCGTGCCATCATCCAC
AAACCCGCCATCGTGCTTGCGGACGAACCGACCGGCAACCTTGACACGCAAAATGGGCGCGAGATCATCACGCTGCTCAA
AAACTCCGTGCGCAAATTCGGACAGACGCTCATCCTTATCACGCATGATCCTGCCATCGCCGCGCAGGCCGACCGCGTCA
TCCGCATGCAGGATGGGCAGGTGGTGGAAGGGAGGGCGCGGGCGTGA

Protein sequence : 
MQMRIVMTKDLCKVYGKGETAVQALKSVNIEVEQGEFVAIAGASGSGKSTLLHMLGAVDLPTSGKVLIENRDIYKESEKG
LSVFRRRKIGFVFQFYNLIPVLTAEENIKVPLSLDGKEPDPAFLNELIDTLGLTERRNHLPNQLSGGQQQRVAIGRAIIH
KPAIVLADEPTGNLDTQNGREIITLLKNSVRKFGQTLILITHDPAIAAQADRVIRMQDGQVVEGRARA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-38 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-39 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-39 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-39 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_1873 YP_004092126.1 ABC transporter CP001581.1.gene798.p Protein 1e-64 58
Ethha_1873 YP_004092126.1 ABC transporter CP001581.1.gene598.p Protein 8e-58 52
Ethha_1873 YP_004092126.1 ABC transporter NC_008702.1.4606598. Protein 5e-38 49
Ethha_1873 YP_004092126.1 ABC transporter NC_012469.1.7686878. Protein 9e-41 45
Ethha_1873 YP_004092126.1 ABC transporter NC_012469.1.7685735. Protein 9e-41 44