Gene Information

Name : Ethha_1870 (Ethha_1870)
Accession : YP_004092123.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2003906 - 2004703 bp
Length : 798 bp
Strand : +
Note : KEGG: mac:MA3353 IstB helper protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase

DNA sequence :
ATGACGGAACTGACGATGGAACGTCTCAGGGAAAACCTCGAAAGCCTTAAGATGAAAAACACGCTGGAGATATTGGACAA
TTATCTTGAAAGAGCTGTAAAGGACGAACTTAACGTTGTAGATGTGCTCGACCATATCTTTGCCGAGGAAGCATTGTCAA
AACGGCGACGCGCCTATGAAAAGCAGGTGCAAATGTCCGGATTTCCCATCAAAAAAACGTTGGAGGATTTTGATTTCAGT
TTCCAGCCCTCCATTGACAAGCGCCAGATTGAAGAACTGGCTACCATGCGTTTCCTTGAAAACGGAGAGAATATCGTCTT
CCTCGGCCCGCCCGGTGTGGGCAAGACCCATCTGGCCTCAGCACTGGGGCTGGTTGCCGCCAAGCATCGATTCTCCACCT
ATTACATCAACTGCCACACCCTAATTGAGCAGCTCAAAAAGGCTCATTTTGAGAATAGACTACCGGACAAGCTCAAAACT
CTGGGCAAGTACAAAATGCTCATCATTGACGAAATTGGCTATCTCCCGATGGATATTCAGGGGGCGAATCTGTTTTTTCA
ACTGATTGCGAGACGTTATGAGAGAGTCTCCACGATCTTTACCTCCAATAAGACCTTTTCCCAATGGAATGAGATCTTCG
CCGACGTCACTATCGCCTTTGCAATCCTAGACCGTGTTTTGCACCACTGCACCGTTGTCAATATCAAGGGTGAGAGCTAT
CGCCTTAAAGAGCGAAAGGAGTACATGAAGCAGAAGCAGCACATCGTCAACACCCTTTTCGAGCAGGGCCAAAACTAA

Protein sequence :
MTELTMERLRENLESLKMKNTLEILDNYLERAVKDELNVVDVLDHIFAEEALSKRRRAYEKQVQMSGFPIKKTLEDFDFS
FQPSIDKRQIEELATMRFLENGENIVFLGPPGVGKTHLASALGLVAAKHRFSTYYINCHTLIEQLKKAHFENRLPDKLKT
LGKYKMLIIDEIGYLPMDIQGANLFFQLIARRYERVSTIFTSNKTFSQWNEIFADVTIAFAILDRVLHHCTVVNIKGESY
RLKERKEYMKQKQHIVNTLFEQGQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-44 41
unnamed CAA21402.1 - Not tested HPI Protein 3e-44 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-44 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 4e-45 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-44 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-44 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-44 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-44 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-44 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-44 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-44 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_1870 YP_004092123.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 1e-44 41
Ethha_1870 YP_004092123.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 2e-45 41
Ethha_1870 YP_004092123.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 1e-44 41
Ethha_1870 YP_004092123.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 1e-44 41