Gene Information

Name : Ethha_1857 (Ethha_1857)
Accession : YP_004092112.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Unknown
Product : Resolvase domain
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1994530 - 1996113 bp
Length : 1584 bp
Strand : +
Note : PFAM: Resolvase domain; Recombinase; KEGG: spa:M6_Spy1124 site-specific recombinase

DNA sequence :
TTGGAGCAGCAAAAGAAAGTAACCACTATCCCGGCGTCCCGGACGCGCTTTTCCTCCACTCCTATCACAGAGAAAAAGAA
ACGCAAGGTCGCCGGATACGCCCGCGTCTCAACAGACCATGACGACCAGTTCACGAGCTACGAGGCGCAGATCGATTATT
ACACCAACTACATCAAGGGCCGCGACGACTGGGAATTCGTGAACGTCTACACGGACGAAGGAATCAGCGGAACCGGCATC
AAGAAGAGAATTGGATTCCAGAACATGATCGAGGACGCGCTCGCTGGGAAGATCGACCTGATCGTCACCAAGAGCGTCAG
CCGCTTCGCCCGGAACACCGTCGACAGCCTGACAACCATCCGGAAACTCAAGGAAAACGGCGTCGAATGCTACTTTGAAA
AAGAGAACATCTGGACCTTCGACGGAAAAGGTGAATTGCTGATCACCATCATGTCGAGCCTTGCGCAGGAGGAATCCCGT
AGCATTTCCGAGAACTGCACCTGGGGACAACGTAAGCGATTCGCAGACGGCAAGGTGACGGTTCCGTTCCACCGGTTTCT
CGGCTACGACCGCGGTCCGAATGGCGAGCTCATCGTCAACCCAGAGGAGGCAGAAACCGTCCGCCGCATCTACCGGCTCT
TCCTGCAGGGCCTGACCTACAACGGCATCGCCAAGCAGCTTACCAATGACGGCATCAAGACACCCGGCGGCAAGGATCAC
TGGAGCATCAGTACCGTCAAGTCCATCCTCGGAAACGAGAAATACAAGGGCGACGCCCTGCTGCAGAAATCCTACACAGT
CGACTACCTCACGAAAAAGACGAAGGTCAACGAGGGCGAAATCCCGCAGTACTACGTGGAAGGCGACCATGAAGCGATCA
TCGCACCGGAGACCTTCGACCTGGTCCAGCGCGAGATGAAGAAGCGCGGCAACGGCATCATGTACCACAGCGGCGTACAC
GTCTTCTCCAGCAAAATCCGCTGCGGGCAGTGCGGCTCCTTCTACGGCTCCAAGGTCTGGCATTCCAACAGCAAATATCG
GAAAACTATCTGGCGCTGTAACCATAAATACGATGGCTGCAAGAAATGCACCACGCCAGCCATAGACGACAGCGAAGTGA
AAACCGCGTTCCTCTCGGCGGTGAACAAGCTGCTTGAAACAAAAGCCGAGGTCATCGCCAACGGCAAAGAGATGCTACCG
TTCCTCTTCAAGACCGACGAACTGGAAGCCGAGCGCGACCGGCTCCTGGATGAGGCACAGATGGTGGCGGACGCAGTGCA
GCAAAACATCGTGGAGAACGCCCGGACGGCTCTCGACCAGAACGCCTATAAGAAGCACTACGACGACCTTGCCGACCGGT
ACGATAAGCTCAAGACCCGCATCGAAGAGCTCACCGCAAAAATCGAAGAAACTCAATCCCGGAAAGCCGGGTACGAGGAC
TTCCTCAAGGCATTCGAAAACACGCCCGAGAGCCTGACGGAATTCTCCCTCGATGCCTTCAACGGACTCGTCGATCACCT
GACGATCTACGCCAATGACGACATCCGCTTCACCTTCCGCAATGGACAGGAAATCAAAGCCTAA

Protein sequence :
MEQQKKVTTIPASRTRFSSTPITEKKKRKVAGYARVSTDHDDQFTSYEAQIDYYTNYIKGRDDWEFVNVYTDEGISGTGI
KKRIGFQNMIEDALAGKIDLIVTKSVSRFARNTVDSLTTIRKLKENGVECYFEKENIWTFDGKGELLITIMSSLAQEESR
SISENCTWGQRKRFADGKVTVPFHRFLGYDRGPNGELIVNPEEAETVRRIYRLFLQGLTYNGIAKQLTNDGIKTPGGKDH
WSISTVKSILGNEKYKGDALLQKSYTVDYLTKKTKVNEGEIPQYYVEGDHEAIIAPETFDLVQREMKKRGNGIMYHSGVH
VFSSKIRCGQCGSFYGSKVWHSNSKYRKTIWRCNHKYDGCKKCTTPAIDDSEVKTAFLSAVNKLLETKAEVIANGKEMLP
FLFKTDELEAERDRLLDEAQMVADAVQQNIVENARTALDQNAYKKHYDDLADRYDKLKTRIEELTAKIEETQSRKAGYED
FLKAFENTPESLTEFSLDAFNGLVDHLTIYANDDIRFTFRNGQEIKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 4e-85 47
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 4e-85 47