Gene Information

Name : Ethha_1823 (Ethha_1823)
Accession : YP_004092079.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Unknown
Product : SNF2-related protein
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 1966443 - 1967795 bp
Length : 1353 bp
Strand : +
Note : KEGG: det:DET1096 SNF2 domain-containing protein; PFAM: SNF2-related protein; SMART: DEAD-like helicase

DNA sequence :
ATGCAAAAACTAAGTGACCTTCATTCCTACCAGAAATACTGCGTCTCCTATATCGAGACTCACAACACAGCTGCCATCTT
CCTTGATTGCGGTCTTGGGAAAACCATCATCACGCTGACTGCTGCCGTCGACCTTCTGTTTGACAGCTTCGAGGTCAGCC
GGATTCTCGTAGTCGCGCCTCTTCGAGTGGCCCGCGACACCTGGCCCGCTGAAATCAGGAAATGGGAGCACCTCTCCGGT
CTCACCTACGCCGTTGCAGTCGGAACCGCACGGGAACGCAAGGCGGCACTCATGCAACAGGCGGATATTACGATCATCAA
CCGGGAGAACCTTGGATGGCTGATCGACGACTCCGGCATTCCCTTCACCTACGACATGGTGGTATTGGACGAGCTCTCCT
CCTTCAAGAACCACAAGTCAAAGCGGTTCCGCGCCCTGATGAAGGTCAGGCCCAAGGTGAAGCGGATCATCGGCCTCACC
GGCACGCCATCAAGCAACGGATTGATGGATCTGTGGGCGGAGTTCAAGGTGCTGGACAAGGGAGAACGTCTCGGACGCTT
CATCACCCAGTACCGGACGGCCTACTTCATGCCCGACAAGCGCAACGGCGAGATCATCTACTCCTACAAGCCGCTGCCGT
ATGCAGAGGACGCGATCTACCGGAAAATCTCGGATATCACGATTTCCATGAAGTCGACCGATCATCTGAAGATGCCGGAG
CTCATCTCCACGCAGTACGAGGTGCAGCTGTCCGCCGAGGAGCGCAAACGGTACGAGGAGCTGAAGAACGATCTGGTGCT
GGAACTTCACGGCGACGAGATCACCGCAGCGAACGCGGCAACGCTTACCGGGAAGCTCTCTCAGCTTGCAAACGGCGCGA
TCTACTCCGACGACGGGAAGATCATCGAATTCCATGACCGGAAGCTCGACGCCTTGGAGGACATCATCGAGGCCGCGAAC
GGGAAGCCGCTGCTTGTCGCCTACTGGTTCCGGCACGATCTGGAGAGAATCCGCAGACGGTTCGACGTCCGGGAGATCAA
GTCGTCGCAGGACATCGATGACTGGAATGCGGGCAATATTCCTGTAGCAGTCATCCACCCGGCCTCCGCCGGTCACGGGC
TCAACCTGCAGTCCGGCGGATCGACGCTTGTCTGGTTCGGCCTCACGTGGTCATTGGAGCTCTACCAGCAGACGAACGCA
AGGCTCTGGCGGCAAGGCCAGAAAAGCCGGACCGTCGTCATCCAGCACATCGTCACTGCGAGCACCATTGACGGGCAGAT
CCTCAACGCCTTGAAACACAAGGACAAGACGCAGTCAGCGCTTATCGCTGCGGTGAAGGCGGTGATGCGATGA

Protein sequence :
MQKLSDLHSYQKYCVSYIETHNTAAIFLDCGLGKTIITLTAAVDLLFDSFEVSRILVVAPLRVARDTWPAEIRKWEHLSG
LTYAVAVGTARERKAALMQQADITIINRENLGWLIDDSGIPFTYDMVVLDELSSFKNHKSKRFRALMKVRPKVKRIIGLT
GTPSSNGLMDLWAEFKVLDKGERLGRFITQYRTAYFMPDKRNGEIIYSYKPLPYAEDAIYRKISDITISMKSTDHLKMPE
LISTQYEVQLSAEERKRYEELKNDLVLELHGDEITAANAATLTGKLSQLANGAIYSDDGKIIEFHDRKLDALEDIIEAAN
GKPLLVAYWFRHDLERIRRRFDVREIKSSQDIDDWNAGNIPVAVIHPASAGHGLNLQSGGSTLVWFGLTWSLELYQQTNA
RLWRQGQKSRTVVIQHIVTASTIDGQILNALKHKDKTQSALIAAVKAVMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 3e-91 51
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 3e-91 49
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 9e-94 49
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 5e-96 48
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 9e-96 48