Gene Information

Name : Ethha_1129 (Ethha_1129)
Accession : YP_004091411.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1240350 - 1241036 bp
Length : 687 bp
Strand : +
Note : KEGG: dsy:DSY3866 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGAAAAAGATTTTGATTGTTGAGGACGATGAAAACATAGCGGAACTCGAGCGCGATTATCTGAAGCTGAACGGATATCG
AGCCGATATCGAACCCGACGGGCAGAAAGCCTGCCAGAAAGCGCTGGGCGGTGGCTATGCCGCCCTGATCATCGACCTGA
TGCTGCCGGGGAAAAACGGCTTCGACATCATCCGCGACGTGCGAAGCACACAGGAGGTGCCGATCATCGTAGTCTCAGCC
AAGGCCGAAGATATCGACAAGATTCGCGGCCTGGATGTCGGCGCCGACGATTACCTGACGAAACCGTTCAGCCCTGCGGA
ATTGATTGCCCGTGTCCAGTCACATATCCGCCGTTATGAGCGCCTGAAAGGAAACAAAACACAGGAAGAAATTCTGTCTT
TTCGCGGGTTGGAAATCCACCACGCCGCGCGCAGGGTCACTGTGAGCGGCCGGGAAGTGCAACTGACAGCGAAAGAATAT
GACCTGTTGTATTTTCTTGCGTCCAATCCCAACATCGTGTTTACCAAAGAGCACCTGTTTGATACCATCTGGGGTGTGGA
CGATTACGGTGATCTGGCGACGGTCCCGGTGCACATCCAGCGGATCCGGAAAAAGATCGAGAAAGACCCGTCCAACCCGG
ACTATATTGAAACGCTCTGGGGCACCGGCTATCGGTTCCACGGGTAA

Protein sequence : 
MKKILIVEDDENIAELERDYLKLNGYRADIEPDGQKACQKALGGGYAALIIDLMLPGKNGFDIIRDVRSTQEVPIIVVSA
KAEDIDKIRGLDVGADDYLTKPFSPAELIARVQSHIRRYERLKGNKTQEEILSFRGLEIHHAARRVTVSGREVQLTAKEY
DLLYFLASNPNIVFTKEHLFDTIWGVDDYGDLATVPVHIQRIRKKIEKDPSNPDYIETLWGTGYRFHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-37 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family AF155139.2.orf0.gene Protein 4e-49 45
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family NC_007793.3914065.p0 Protein 9e-35 43
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family NC_002758.1121390.p0 Protein 9e-35 43
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family NC_010079.5776364.p0 Protein 9e-35 43
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family NC_002952.2859858.p0 Protein 9e-35 43
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family NC_007622.3794948.p0 Protein 9e-35 43
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family NC_003923.1003417.p0 Protein 9e-35 43
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family NC_013450.8614146.p0 Protein 9e-35 43
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family NC_002951.3238224.p0 Protein 9e-35 43
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family AE015929.1.gene1106. Protein 6e-32 42
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family FJ349556.1.orf0.gene Protein 3e-42 41
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family NC_012469.1.7685629. Protein 3e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family VFG1563 Protein 1e-37 42
Ethha_1129 YP_004091411.1 two component transcriptional regulator, winged helix family VFG1702 Protein 5e-37 42