Gene Information

Name : Ethha_1035 (Ethha_1035)
Accession : YP_004091319.1
Strain : Ethanoligenens harbinense YUAN-3
Genome accession: NC_014828
Putative virulence/resistance : Resistance
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1140618 - 1141316 bp
Length : 699 bp
Strand : +
Note : KEGG: cdl:CDR20291_0860 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCAGAGGCTTTTGGTAGTGGAAGACGATCCCGCGCTGGTGACGGGGCTGCGGTACAGTATGGAAAAGGACGGGTTTCA
GGTGCGGACGGCCGGCAGTGTGCGGGAAGGGTGGCAGGCGTTTTCGCAGGACAGGCCCGATCTGGTGGTGCTGGATGTCG
GCCTGCCGGACGGCACGGGGTTTGACCTCTGCCGGCAAATTCGGGTGGAGAACGGCACGCCCATTTTGTTCCTGACCGCG
TGCGATGAGGAAACGCAGGTCGTGATGGGCCTCGATATGGGCGGCGACGATTATATAACCAAGCCGTTCCGCCTGCGGGA
GCTGCTCTCGCGTGTCCGGGCCCTGCTCCGCCGCAGTGCGGACAAGCCTGTCAAAACACTGGTTTCCGGCGCCGTCACGC
TCGATACGGAGGAAGCCCATGTCTGCCGCAATGGGGAAGAGATCTCGCTCACACCGGCGGAATACCGGCTGCTGCGCCTG
CTGATGCAGAACGAGGGGCGAACCCTGACCCGTGAGCAGTTATTGGATACGCTGTGGGACAGCGGCGGGGATTTTGTGGA
TGAAAACACGCTGTCGGTCTATATTCGCCGTCTGCGGGCTAAAATAGAGGACAACCCCTCGTCCCCCGTGCACATCCATA
CGGTGCGGGGCGTGGGATACCGTTGGAAAGCGGAGGAGGGCGGGGAAGCATGTCGATGA

Protein sequence : 
MQRLLVVEDDPALVTGLRYSMEKDGFQVRTAGSVREGWQAFSQDRPDLVVLDVGLPDGTGFDLCRQIRVENGTPILFLTA
CDEETQVVMGLDMGGDDYITKPFRLRELLSRVRALLRRSADKPVKTLVSGAVTLDTEEAHVCRNGEEISLTPAEYRLLRL
LMQNEGRTLTREQLLDTLWDSGGDFVDENTLSVYIRRLRAKIEDNPSSPVHIHTVRGVGYRWKAEEGGEACR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-23 41
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_1035 YP_004091319.1 two component transcriptional regulator, winged helix family AE000516.2.gene3505. Protein 2e-35 44
Ethha_1035 YP_004091319.1 two component transcriptional regulator, winged helix family AF310956.2.orf0.gene Protein 7e-24 41
Ethha_1035 YP_004091319.1 two component transcriptional regulator, winged helix family U35369.1.gene1.p01 Protein 7e-23 41
Ethha_1035 YP_004091319.1 two component transcriptional regulator, winged helix family AE016830.1.gene2255. Protein 7e-23 41
Ethha_1035 YP_004091319.1 two component transcriptional regulator, winged helix family NC_012469.1.7685629. Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ethha_1035 YP_004091319.1 two component transcriptional regulator, winged helix family VFG1390 Protein 4e-26 44